Gene
RNA
| Item | Value |
|---|---|
| gene id | G1543850 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 36563299 ~ 36563531 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1766706 | True | 233 | lncRNA | 0.36 | 1 | 36563299 | 36563531 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| angpt1 | LOC106588502 | coding | downstream | 2586 | 36498812 ~ 36560713 (-) |
| abrab | LOC106570048 | coding | downstream | 97941 | 36464570 ~ 36465358 (-) |
| samd12 | LOC106588503 | coding | downstream | 101838 | 36336515 ~ 36461461 (-) |
| ext1b | LOC103365060 | coding | downstream | 254901 | 36196135 ~ 36308398 (-) |
| LOC110496110 | LOC106588509 | coding | downstream | 462382 | 36084134 ~ 36100917 (-) |
| LOC110496117 | LOC106612724 | coding | upstream | 180847 | 36744378 ~ 36747323 (-) |
| sdc2 | LOC106570046 | coding | upstream | 195654 | 36759185 ~ 36793397 (-) |
| LOC110496119 | ppp1r36 | coding | upstream | 236985 | 36800516 ~ 36813545 (-) |
| LOC110496120 | LOC106588498 | coding | upstream | 260333 | 36823864 ~ 36835060 (-) |
| zgc:114119 | LOC106588497 | coding | upstream | 367769 | 36931300 ~ 36939648 (-) |
| G1543739 | NA | non-coding | downstream | 77144 | 36485790 ~ 36486155 (-) |
| G1543727 | NA | non-coding | downstream | 85822 | 36477133 ~ 36477477 (-) |
| G1543639 | NA | non-coding | downstream | 193602 | 36367932 ~ 36369697 (-) |
| G1543605 | NA | non-coding | downstream | 247036 | 36315839 ~ 36316263 (-) |
| G1543853 | NA | non-coding | upstream | 1403 | 36564934 ~ 36565274 (-) |
| G1543855 | NA | non-coding | upstream | 2112 | 36565643 ~ 36566449 (-) |
| G1544000 | NA | non-coding | upstream | 98017 | 36661548 ~ 36662896 (-) |
| G1544246 | NA | non-coding | upstream | 202979 | 36766510 ~ 36766817 (-) |
| G1544252 | NA | non-coding | upstream | 218581 | 36782112 ~ 36782444 (-) |
| G1543346 | LOC106588513 | other | downstream | 550613 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 1059142 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 1066317 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 1213637 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 1383271 | 35151351 ~ 35203984 (-) |
| G1544806 | NA | other | upstream | 737977 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 1358624 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 1584059 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 1601719 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 1996118 | 38557052 ~ 38563365 (-) |
