Gene
RNA
| Item | Value |
|---|---|
| gene id | G1557879 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 49084672 ~ 49086021 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1782324 | True | 224 | lncRNA | 0.35 | 2 | 49084672 | 49086021 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496409 | LOC106588651 | coding | downstream | 233437 | 48837413 ~ 48851235 (-) |
| LOC110496408 | rb39b | coding | downstream | 250024 | 48829188 ~ 48834648 (-) |
| LOC118941242 | NA | coding | downstream | 256568 | 48827969 ~ 48828104 (-) |
| LOC110496407 | LOC106588649 | coding | downstream | 256590 | 48818937 ~ 48828082 (-) |
| LOC118941178 | NA | coding | downstream | 328803 | 48754530 ~ 48755869 (-) |
| LOC110496414 | LOC106570277 | coding | upstream | 37728 | 49123749 ~ 49131358 (-) |
| LOC110496416 | LOC106588659 | coding | upstream | 44907 | 49130928 ~ 49134380 (-) |
| LOC110496415 | LOC106588660 | coding | upstream | 50721 | 49134674 ~ 49146147 (-) |
| LOC110496840 | LOC106588661 | coding | upstream | 64264 | 49150285 ~ 49182882 (-) |
| LOC110496418 | LOC106588662 | coding | upstream | 100651 | 49186672 ~ 49200574 (-) |
| G1557376 | NA | non-coding | downstream | 44220 | 49040180 ~ 49040452 (-) |
| G1557360 | NA | non-coding | downstream | 54656 | 49029769 ~ 49030016 (-) |
| G1557202 | NA | non-coding | downstream | 349884 | 48734557 ~ 48734788 (-) |
| G1557188 | NA | non-coding | downstream | 368905 | 48715563 ~ 48715767 (-) |
| G1557184 | NA | non-coding | downstream | 378661 | 48705790 ~ 48706011 (-) |
| G1557993 | NA | non-coding | upstream | 176636 | 49262657 ~ 49319527 (-) |
| G1558076 | NA | non-coding | upstream | 391331 | 49477352 ~ 49477569 (-) |
| G1558118 | LOC106582599 | non-coding | upstream | 458292 | 49544313 ~ 49544584 (-) |
| G1558134 | NA | non-coding | upstream | 494953 | 49580974 ~ 49581482 (-) |
| G1556577 | NA | other | downstream | 727825 | 48356613 ~ 48356847 (-) |
| LOC110496401 | LOC106588640 | other | downstream | 1101063 | 47982726 ~ 47986560 (-) |
| LOC110496837 | LOC106588626 | other | downstream | 1139098 | 47890580 ~ 47945574 (-) |
| G1555543 | NA | other | downstream | 1538101 | 47543208 ~ 47546614 (-) |
| G1555168 | NA | other | downstream | 2171757 | 46911977 ~ 46912915 (-) |
| G1558535 | NA | other | upstream | 881875 | 49967896 ~ 49968608 (-) |
| LOC110496434 | LOC106588680 | other | upstream | 937070 | 50023087 ~ 50034167 (-) |
| LOC110496438 | LOC106588686 | other | upstream | 1270248 | 50256021 ~ 50359132 (-) |
| G1558916 | NA | other | upstream | 1350976 | 50436997 ~ 50437459 (-) |
| G1559205 | NA | other | upstream | 1537070 | 50623091 ~ 50623983 (-) |
