trnak-uuu-127


Basic Information

Item Value
gene id trnak-uuu-127
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 19994594 ~ 19994666 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnak-uuu-127
Gcccggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnak-uuu-127 True 73 mRNA 0.56 1 19994594 19994666

Neighbor

gene id symbol gene type direction distance location
LOC110498680 LOC106609964 coding downstream 128557 19841386 ~ 19866037 (-)
doc2d LOC106609963 coding downstream 190287 19751809 ~ 19804307 (-)
LOC110497528 LOC106609961 coding downstream 253574 19737907 ~ 19741020 (-)
LOC110497529 LOC100136072 coding downstream 257921 19666386 ~ 19751340 (-)
LOC110498685 LOC106602680 coding downstream 324990 19668259 ~ 19669604 (-)
LOC110497518 LOC106609978 coding upstream 208684 20203350 ~ 20274981 (-)
adra1b adra1b coding upstream 425390 20420056 ~ 20440924 (-)
LOC110497516 LOC106609982 coding upstream 1129361 21124027 ~ 21128524 (-)
LOC110497514 LOC106610028 coding upstream 1768500 21763166 ~ 21790562 (-)
LOC110497512 LOC106610027 coding upstream 1804589 21799255 ~ 21820806 (-)
G1599861 NA non-coding downstream 167166 19827133 ~ 19827428 (-)
G1599785 NA non-coding downstream 168196 19825503 ~ 19826398 (-)
G1599762 NA non-coding downstream 351011 19643321 ~ 19643583 (-)
G1599761 NA non-coding downstream 351366 19643014 ~ 19643228 (-)
G1599959 LOC106609974 non-coding upstream 24151 20018817 ~ 20033190 (-)
G1599977 NA non-coding upstream 40102 20034768 ~ 20034984 (-)
G1599978 NA non-coding upstream 40859 20035525 ~ 20035728 (-)
G1599981 LOC106609973 non-coding upstream 44871 20039537 ~ 20040011 (-)
G1599982 NA non-coding upstream 47065 20041731 ~ 20041943 (-)
G1599758 LOC106609957 other downstream 352591 19638760 ~ 19642003 (-)
G1599760 LOC106609957 other downstream 357567 19636018 ~ 19637027 (-)
G1599717 NA other downstream 437237 19555597 ~ 19557357 (-)
G1599197 NA other downstream 612843 19372309 ~ 19381751 (-)
G1599097 LOC106609944 other downstream 784630 19209292 ~ 19209964 (-)
G1600014 LOC106609977 other upstream 113249 20107915 ~ 20108791 (-)
G1600030 NA other upstream 132545 20127211 ~ 20136561 (-)
G1602753 NA other upstream 2408850 22403516 ~ 22403837 (-)
G1602763 NA other upstream 2420752 22415418 ~ 22416043 (-)
LOC110497482 LOC106610017 other upstream 3147150 23121508 ~ 23168994 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) trnak-uuu_22 NA coding NC_053131.1 CM020928.1 14939806 ~ 14939878 (-)
striped catfish (Pangasianodon hypophthalmus) trnak-uuu_21 NA coding NC_047622.1 CM018568.1 317582 ~ 317654 (+)
tiger barb (Puntius tetrazona) trnak-uuu_107 NA coding NC_056715.1 CM032084.1 4910050 ~ 4910122 (-)
tiger barb (Puntius tetrazona) trnaa-cgc_14 NA coding NC_056704.1 CM032073.1 13440955 ~ 13441026 (-)
mexican tetra (Astyanax mexicanus) trnak-uuu_21 NA non-coding NC_035902.1 CM008305.1 25581871 ~ 25581943 (-)
mexican tetra (Astyanax mexicanus) trnak-uuu_34 NA non-coding NC_035902.1 CM008305.1 25591433 ~ 25591505 (-)