Gene
RNA
| Item | Value |
|---|---|
| gene id | G1599861 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 19827133 ~ 19827428 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1831840 | True | 296 | lncRNA | 0.43 | 1 | 19827133 | 19827428 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| doc2d | LOC106609963 | coding | downstream | 22826 | 19751809 ~ 19804307 (-) |
| LOC110497528 | LOC106609961 | coding | downstream | 86113 | 19737907 ~ 19741020 (-) |
| LOC110497529 | LOC100136072 | coding | downstream | 90460 | 19666386 ~ 19751340 (-) |
| LOC110498685 | LOC106602680 | coding | downstream | 157529 | 19668259 ~ 19669604 (-) |
| LOC118941464 | NA | coding | downstream | 217212 | 19594353 ~ 19609921 (-) |
| LOC110498680 | LOC106609964 | coding | upstream | 13958 | 19841386 ~ 19866037 (-) |
| trnak-uuu-127 | NA | coding | upstream | 167166 | 19994594 ~ 19994666 (-) |
| LOC110497518 | LOC106609978 | coding | upstream | 375922 | 20203350 ~ 20274981 (-) |
| adra1b | adra1b | coding | upstream | 592628 | 20420056 ~ 20440924 (-) |
| LOC110497516 | LOC106609982 | coding | upstream | 1296599 | 21124027 ~ 21128524 (-) |
| G1599785 | NA | non-coding | downstream | 735 | 19825503 ~ 19826398 (-) |
| G1599762 | NA | non-coding | downstream | 183550 | 19643321 ~ 19643583 (-) |
| G1599761 | NA | non-coding | downstream | 183905 | 19643014 ~ 19643228 (-) |
| G1599758 | LOC106609957 | non-coding | downstream | 185130 | 19638760 ~ 19642003 (-) |
| G1599959 | LOC106609974 | non-coding | upstream | 191389 | 20018817 ~ 20033190 (-) |
| G1599977 | NA | non-coding | upstream | 207340 | 20034768 ~ 20034984 (-) |
| G1599978 | NA | non-coding | upstream | 208097 | 20035525 ~ 20035728 (-) |
| G1599981 | LOC106609973 | non-coding | upstream | 212109 | 20039537 ~ 20040011 (-) |
| G1599982 | NA | non-coding | upstream | 214303 | 20041731 ~ 20041943 (-) |
| G1599760 | LOC106609957 | other | downstream | 190106 | 19636018 ~ 19637027 (-) |
| G1599717 | NA | other | downstream | 269776 | 19555597 ~ 19557357 (-) |
| G1599197 | NA | other | downstream | 445382 | 19372309 ~ 19381751 (-) |
| G1599097 | LOC106609944 | other | downstream | 617169 | 19209292 ~ 19209964 (-) |
| G1600014 | LOC106609977 | other | upstream | 280487 | 20107915 ~ 20108791 (-) |
| G1600030 | NA | other | upstream | 299783 | 20127211 ~ 20136561 (-) |
| G1602753 | NA | other | upstream | 2576088 | 22403516 ~ 22403837 (-) |
| G1602763 | NA | other | upstream | 2587990 | 22415418 ~ 22416043 (-) |
| LOC110497482 | LOC106610017 | other | upstream | 3314388 | 23121508 ~ 23168994 (-) |
