G1600014 (LOC106609977)


Basic Information

Item Value
gene id G1600014
gene name LOC106609977
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 20107915 ~ 20108791 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1832008
CTGAGAGTTTCTCCAGCCTCTCGTCCAGCTCCAGACGCTCAAAGGCCCTTGCCTTCAGCCTGGCCAGACCCTCCTCATAGGCCGCCTCCACTGCGCTCGCCGCCACATTCGCCGCCACCGCCACGGCCGTGCTTTGGTTGCTGTGGGAACCGTGATGGTCACCGGCTGCACTCATGGCTTTCttcacaaagatctcccccaggGGGAACTCTACATTGGGGATGTAGAGAGCCGCGGCGTTGGACGTTGTGGACAAACCGCCGAGGTCGTCGGGACAGGGAAGCTCGCGGCACGGGAAGCGACGCTCCTTGAAGTCCCTGAAGGCGGAAGACCGGAGTTGAAGTCCGTCGAAGGGGTCGTTGTTGTTGCTGCGGTTGCCGCCGGGGGCAGAAGGAGCGAGGAGAAGGTCTCCGTCGGCCACCAGGGGGAGTAGTGCAGCGGCGTCACACACGCTGTTGGACTTGGAGAGCACGTAGAGCGTCTCGTAGGTATGGCTGTACTCCAGGTGGGCGCGGAGGGAGGACAGCGACCGGAAGCGTTTGTGCTCCCCGCAACGAGGACAGCGGTAGGGCAGGTCCAAAGAAGCCATTCCGCGAAAGGCCGGCGGGGGGCCCCTCACGCGGCACAGCGGCGCAGACACGCCGCGGGCGTACTACTCACCGAGTACTGGGCGGGTCCTCTCATGGTACAAAAATGGTGGTGGTGAGAGTTAGATGAGGGCGAGAAGGAAGAGGGATGTCTGAGGGAGGCGAGAATTAGACCAAAGGCCATTCACGCCATCACACATAGtgacagtctgacacacacaaacacaaacccgCAGATTCAGAATCTTCTTAGGTTGTAGATTTGTTCCTCGTCACCGTTACTTCTGCCT

Function

NR:

description
F-box only protein 41-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1832008 True 877 TUCP 0.61 1 20107915 20108791

Neighbor

gene id symbol gene type direction distance location
trnak-uuu-127 NA coding downstream 113249 19994594 ~ 19994666 (-)
LOC110498680 LOC106609964 coding downstream 241878 19841386 ~ 19866037 (-)
doc2d LOC106609963 coding downstream 303608 19751809 ~ 19804307 (-)
LOC110497528 LOC106609961 coding downstream 366895 19737907 ~ 19741020 (-)
LOC110497529 LOC100136072 coding downstream 371242 19666386 ~ 19751340 (-)
LOC110497518 LOC106609978 coding upstream 94559 20203350 ~ 20274981 (-)
adra1b adra1b coding upstream 311265 20420056 ~ 20440924 (-)
LOC110497516 LOC106609982 coding upstream 1015236 21124027 ~ 21128524 (-)
LOC110497514 LOC106610028 coding upstream 1654375 21763166 ~ 21790562 (-)
LOC110497512 LOC106610027 coding upstream 1690464 21799255 ~ 21820806 (-)
G1599995 NA non-coding downstream 40320 20067214 ~ 20067595 (-)
G1599990 NA non-coding downstream 52253 20055457 ~ 20055662 (-)
G1599988 NA non-coding downstream 57430 20050173 ~ 20050485 (-)
G1599985 NA non-coding downstream 61113 20046125 ~ 20046802 (-)
G1599986 LOC106609973 non-coding downstream 62622 20043374 ~ 20045293 (-)
G1600016 LOC106609977 non-coding upstream 2012 20110803 ~ 20111086 (-)
G1600018 NA non-coding upstream 6166 20114957 ~ 20115198 (-)
G1600041 NA non-coding upstream 51715 20160506 ~ 20163140 (-)
G1600043 NA non-coding upstream 57893 20166684 ~ 20168077 (-)
G1599758 LOC106609957 other downstream 465912 19638760 ~ 19642003 (-)
G1599760 LOC106609957 other downstream 470888 19636018 ~ 19637027 (-)
G1599717 NA other downstream 550558 19555597 ~ 19557357 (-)
G1599197 NA other downstream 726164 19372309 ~ 19381751 (-)
G1599097 LOC106609944 other downstream 897951 19209292 ~ 19209964 (-)
G1600030 NA other upstream 18420 20127211 ~ 20136561 (-)
G1602753 NA other upstream 2294725 22403516 ~ 22403837 (-)
G1602763 NA other upstream 2306627 22415418 ~ 22416043 (-)
LOC110497482 LOC106610017 other upstream 3033025 23121508 ~ 23168994 (-)
G1604902 NA other upstream 3864999 23973790 ~ 23974106 (-)

Expression


Co-expression Network