G1600030


Basic Information

Item Value
gene id G1600030
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 20127211 ~ 20136561 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1832025
gacacgccgcttggtccgttggtggtgggtgattctgtaatgagtttcgtcttcatacgaaggagagtcggaccaaaatgcagcgtgtggtttacgatccatgtttattaataatacgaaacacgaatctccaatacaatactacaaaacgtaacgaaaccctaacagcctatataatgtgaacacagggacacataggacaggaacaatcacccacaaacacacagtgaaacccaggctacctaaatatggttcccaatcagagacaatgacgaacacctgcctctgactgagaaccatatcaggctgaacatagaaatagacaaacaagacatgaaacatagaatacccactcagatcacaccctgaccaatcaaaacatagaaaatacaaagtaaactatggtcagggcgtgacagcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgtcaaaaacgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttctcaagctttaaaaatcccaaggagcactgtgcaaacgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctgtccgtccctctaaactttcagctcattcaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaaagtgtctttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaaaaatgcaaaatgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacgtggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttaaaaaaaaagcatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatgtcagtctctcgatgtgcaaaactgatagagac

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1832025 True 1537 TUCP 0.43 2 20127211 20136561

Neighbor

gene id symbol gene type direction distance location
trnak-uuu-127 NA coding downstream 132545 19994594 ~ 19994666 (-)
LOC110498680 LOC106609964 coding downstream 261174 19841386 ~ 19866037 (-)
doc2d LOC106609963 coding downstream 322904 19751809 ~ 19804307 (-)
LOC110497528 LOC106609961 coding downstream 386191 19737907 ~ 19741020 (-)
LOC110497529 LOC100136072 coding downstream 390538 19666386 ~ 19751340 (-)
LOC110497518 LOC106609978 coding upstream 66789 20203350 ~ 20274981 (-)
adra1b adra1b coding upstream 283495 20420056 ~ 20440924 (-)
LOC110497516 LOC106609982 coding upstream 987466 21124027 ~ 21128524 (-)
LOC110497514 LOC106610028 coding upstream 1626605 21763166 ~ 21790562 (-)
LOC110497512 LOC106610027 coding upstream 1662694 21799255 ~ 21820806 (-)
G1600018 NA non-coding downstream 12013 20114957 ~ 20115198 (-)
G1600016 LOC106609977 non-coding downstream 16125 20110803 ~ 20111086 (-)
G1599995 NA non-coding downstream 59616 20067214 ~ 20067595 (-)
G1599990 NA non-coding downstream 71549 20055457 ~ 20055662 (-)
G1599988 NA non-coding downstream 76726 20050173 ~ 20050485 (-)
G1600041 NA non-coding upstream 23945 20160506 ~ 20163140 (-)
G1600043 NA non-coding upstream 30123 20166684 ~ 20168077 (-)
G1600074 NA non-coding upstream 136682 20273243 ~ 20273487 (-)
G1600083 NA non-coding upstream 144814 20281375 ~ 20281641 (-)
G1600014 LOC106609977 other downstream 18420 20107915 ~ 20108791 (-)
G1599758 LOC106609957 other downstream 485208 19638760 ~ 19642003 (-)
G1599760 LOC106609957 other downstream 490184 19636018 ~ 19637027 (-)
G1599717 NA other downstream 569854 19555597 ~ 19557357 (-)
G1599197 NA other downstream 745460 19372309 ~ 19381751 (-)
G1602753 NA other upstream 2266955 22403516 ~ 22403837 (-)
G1602763 NA other upstream 2278857 22415418 ~ 22416043 (-)
LOC110497482 LOC106610017 other upstream 3005255 23121508 ~ 23168994 (-)
G1604902 NA other upstream 3837229 23973790 ~ 23974106 (-)
gpr137c LOC106602981 other upstream 4054137 24176332 ~ 24206622 (-)

Expression


Co-expression Network