Gene
RNA
| Item | Value |
|---|---|
| gene id | G1605410 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 24685271 ~ 24685561 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1837867 | True | 291 | lncRNA | 0.43 | 1 | 24685271 | 24685561 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498564 | fabpl | coding | downstream | 117962 | 24565455 ~ 24567309 (-) |
| LOC118941548 | fabpl | coding | downstream | 131247 | 24552373 ~ 24554024 (-) |
| LOC110498563 | fabpl | coding | downstream | 143436 | 24539981 ~ 24541835 (-) |
| LOC110497543 | LOC106603011 | coding | downstream | 209735 | 24398570 ~ 24475536 (-) |
| LOC110497542 | LOC106603001 | coding | downstream | 299411 | 24374558 ~ 24385860 (-) |
| LOC110497545 | LOC106603014 | coding | upstream | 18895 | 24704456 ~ 24727518 (-) |
| LOC110497546 | LOC106603015 | coding | upstream | 106451 | 24792012 ~ 24844151 (-) |
| sptlc2a | sptlc2 | coding | upstream | 161527 | 24847088 ~ 24908731 (-) |
| dio2 | dio2 | coding | upstream | 992646 | 25678207 ~ 25686102 (-) |
| ston2 | ston2 | coding | upstream | 1140229 | 25825790 ~ 25876073 (-) |
| G1605399 | NA | non-coding | downstream | 10416 | 24674646 ~ 24674855 (-) |
| G1605390 | NA | non-coding | downstream | 19061 | 24665874 ~ 24666210 (-) |
| G1605380 | NA | non-coding | downstream | 32981 | 24651984 ~ 24652290 (-) |
| G1605214 | NA | non-coding | downstream | 170512 | 24513735 ~ 24514759 (-) |
| G1605125 | NA | non-coding | downstream | 328058 | 24357011 ~ 24357213 (-) |
| G1606289 | NA | non-coding | upstream | 497286 | 25182847 ~ 25183049 (-) |
| G1606301 | NA | non-coding | upstream | 518237 | 25203798 ~ 25204007 (-) |
| G1606304 | NA | non-coding | upstream | 524735 | 25210296 ~ 25210670 (-) |
| G1606398 | NA | non-coding | upstream | 697199 | 25382760 ~ 25395212 (-) |
| gpr137c | LOC106602981 | other | downstream | 478833 | 24176332 ~ 24206622 (-) |
| G1604902 | NA | other | downstream | 711165 | 23973790 ~ 23974106 (-) |
| LOC110497482 | LOC106610017 | other | downstream | 1540727 | 23121508 ~ 23168994 (-) |
| G1602763 | NA | other | downstream | 2269228 | 22415418 ~ 22416043 (-) |
