Gene
RNA
| Item | Value |
|---|---|
| gene id | G1608521 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 26406774 ~ 26406973 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109075231 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1841284 | True | 200 | lncRNA | 0.42 | 1 | 26406774 | 26406973 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497562 | LOC106603201 | coding | downstream | 79904 | 26313358 ~ 26326870 (-) |
| LOC110497555 | LOC106603151 | coding | downstream | 143892 | 26229014 ~ 26262882 (-) |
| efcab11 | efcab11 | coding | downstream | 263422 | 26057106 ~ 26143352 (-) |
| foxn3 | foxn3 | coding | downstream | 398531 | 25893224 ~ 26008243 (-) |
| ston2 | ston2 | coding | downstream | 530701 | 25825790 ~ 25876073 (-) |
| trnal-cag-28 | NA | coding | upstream | 206396 | 26613369 ~ 26613451 (-) |
| LOC110498692 | LOC106603236 | coding | upstream | 210481 | 26617454 ~ 26640534 (-) |
| LOC110497568 | LOC106603844 | coding | upstream | 244496 | 26651469 ~ 26654910 (-) |
| LOC110497567 | LOC106603250 | coding | upstream | 248040 | 26655013 ~ 26661730 (-) |
| LOC110497570 | LOC106603258 | coding | upstream | 262823 | 26669796 ~ 26680308 (-) |
| G1608505 | NA | non-coding | downstream | 19751 | 26386541 ~ 26387023 (-) |
| G1608475 | NA | non-coding | downstream | 113133 | 26285937 ~ 26293641 (-) |
| G1608472 | NA | non-coding | downstream | 125764 | 26280746 ~ 26281010 (-) |
| G1608412 | NA | non-coding | downstream | 182639 | 26223363 ~ 26224135 (-) |
| G1608445 | NA | non-coding | downstream | 189243 | 26217254 ~ 26217531 (-) |
| G1608527 | NA | non-coding | upstream | 5396 | 26412369 ~ 26438110 (-) |
| G1608613 | NA | non-coding | upstream | 120907 | 26527880 ~ 26528086 (-) |
| G1608617 | NA | non-coding | upstream | 126775 | 26533748 ~ 26534005 (-) |
| G1608621 | NA | non-coding | upstream | 130340 | 26537313 ~ 26537585 (-) |
| G1608626 | NA | non-coding | upstream | 133600 | 26540573 ~ 26540838 (-) |
| dio2 | dio2 | other | downstream | 720672 | 25678207 ~ 25686102 (-) |
| G1606398 | NA | other | downstream | 1011562 | 25382760 ~ 25395212 (-) |
| sptlc2a | sptlc2 | other | downstream | 1550053 | 24847088 ~ 24908731 (-) |
| LOC110497546 | LOC106603015 | other | downstream | 1562637 | 24792012 ~ 24844151 (-) |
| G1608529 | NA | other | upstream | 17058 | 26424031 ~ 26427303 (-) |
| G1608576 | NA | other | upstream | 177965 | 26584938 ~ 26610983 (-) |
| shprh | shprh | other | upstream | 504424 | 26887874 ~ 26912468 (-) |
| G1608844 | LOC106603413 | other | upstream | 530897 | 26937870 ~ 26941380 (-) |
| G1608988 | LOC106603498 | other | upstream | 788775 | 27195748 ~ 27201735 (-) |
