Gene
RNA
| Item | Value |
|---|---|
| gene id | G1608574 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 26611107 ~ 26612224 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1841339 | True | 1118 | lncRNA | 0.35 | 1 | 26611107 | 26612224 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497562 | LOC106603201 | coding | downstream | 284237 | 26313358 ~ 26326870 (-) |
| LOC110497555 | LOC106603151 | coding | downstream | 348225 | 26229014 ~ 26262882 (-) |
| efcab11 | efcab11 | coding | downstream | 467755 | 26057106 ~ 26143352 (-) |
| foxn3 | foxn3 | coding | downstream | 602864 | 25893224 ~ 26008243 (-) |
| ston2 | ston2 | coding | downstream | 735034 | 25825790 ~ 25876073 (-) |
| trnal-cag-28 | NA | coding | upstream | 1145 | 26613369 ~ 26613451 (-) |
| LOC110498692 | LOC106603236 | coding | upstream | 5230 | 26617454 ~ 26640534 (-) |
| LOC110497568 | LOC106603844 | coding | upstream | 39245 | 26651469 ~ 26654910 (-) |
| LOC110497567 | LOC106603250 | coding | upstream | 42789 | 26655013 ~ 26661730 (-) |
| LOC110497570 | LOC106603258 | coding | upstream | 57572 | 26669796 ~ 26680308 (-) |
| G1608575 | NA | non-coding | downstream | 951 | 26609397 ~ 26610156 (-) |
| G1608653 | NA | non-coding | downstream | 29750 | 26580826 ~ 26581357 (-) |
| G1608643 | NA | non-coding | downstream | 38500 | 26572360 ~ 26572607 (-) |
| G1608578 | NA | non-coding | downstream | 43162 | 26563720 ~ 26567945 (-) |
| G1608577 | LOC106603225 | non-coding | downstream | 48664 | 26561631 ~ 26562443 (-) |
| G1608672 | NA | non-coding | upstream | 1987 | 26614211 ~ 26614424 (-) |
| G1608712 | NA | non-coding | upstream | 86468 | 26698692 ~ 26963299 (-) |
| G1608763 | NA | non-coding | upstream | 154627 | 26766851 ~ 26767159 (-) |
| G1608804 | LOC106603381 | non-coding | upstream | 244019 | 26856243 ~ 26857489 (-) |
| G1608863 | NA | non-coding | upstream | 423078 | 27035302 ~ 27037775 (-) |
| G1608576 | NA | other | downstream | 124 | 26584938 ~ 26610983 (-) |
| G1608529 | NA | other | downstream | 183804 | 26424031 ~ 26427303 (-) |
| dio2 | dio2 | other | downstream | 925005 | 25678207 ~ 25686102 (-) |
| G1606398 | NA | other | downstream | 1215895 | 25382760 ~ 25395212 (-) |
| shprh | shprh | other | upstream | 299173 | 26887874 ~ 26912468 (-) |
| G1608844 | LOC106603413 | other | upstream | 325646 | 26937870 ~ 26941380 (-) |
| G1608988 | LOC106603498 | other | upstream | 583524 | 27195748 ~ 27201735 (-) |
| G1608992 | NA | other | upstream | 594006 | 27206230 ~ 27207354 (-) |
| nkx2.9 | nkx2-8 | other | upstream | 1266237 | 27877963 ~ 27879920 (-) |
