G1608988 (LOC106603498)


Basic Information

Item Value
gene id G1608988
gene name LOC106603498
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 27195748 ~ 27201735 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1841799
CGTCAGTTTGGTGGAATGGCTGCAGTCTTATTAGGTATCACCTCCGGACAGAAAGCTTTGAGGCTCAAGTGCAATATCAAATATATCTCCACTGTCCTGCAGCGtcttctctactcctctatcTGTTTTTTTGCTTAGAACCTCCAAGATATTGGATTTTACTGTGCCAATATCTTCCTCAGCATCCAGCCACAGTTCTAGGTCATTCTCTTCCTCTATGTGTGGGTTAGACCCTACTGCATTGGTCATTACCTGTTCTGTTTCAGGGTTTAGGGTGTACAGCACTGTTGCAGGTGGGGTATGCAGTGGCACATGAGGTGCAGTGTCACTGGTTTGCTCAATTTGACTGACTTCACAAAGTTGAGCACTTTCCATTGATTCTGTTAGAACGCAGTCAGTATTCACAGAACTTTTTGCAATAGTACTTGCACTTTCTATTGATTCTGTTAGAAGGCTGTCAGTATTCACTGCAACTTCTGCAACAGTACATGGAGGTGGCCAAATAGCACGCAGTGGTGACTCTAATCCCGCGGACACAACTCCAGTATCTCTGGGTTTAATGTGGAGATGGATATGGACATGGGATTCAATAGATAGTCTCTTTTCAAACGACTCCACTGATTCCTTTGCTGATTCTACTACCATTCCCACTAGTTCCTTCTCATGCCCGCTAGTAGAGTCTGAAACATCAATGGCTTGATCTACTTCAGAATAAATCATGAATTCAGCCTCTGTTCCAAAAACATCTTGCACATCTGCCTGTGAACAAGACTCTGCAAATGTAGTGGGAACTGTGTCGTCAGGTATGCTGTTGAATTCAGAAGTGGGCTCTACAAATGCCTCAGGAGTTTTTCTATCCTCACATACTGTATCAACTTCGAGAGCAATCGAGGGCTCCGTTTCTTTTTCTGAAGGTTCTTGTGCATTTCCCTGAGTATTAAGATCGAAGTAGTTTTCAAATAAATGAATTGTCTTTTGCACCTGTGCAGTTACATGTGGATGTCCTTGACTCTCTAGAACTGCGAATGGTGTATTCTCTGGTGATTTCGAAACTTCTGCTTCACTCGATAATTCAACTTCAGCCTTTTCACTTGATTGTGGTACAACATTGGGGTCTTCTGAAGAGTTCTGCTGCACATGTTGGACAATTTCCTGAGTTATAATACTGCTGGCCTCTTCAAACATGTAGTCCTCAATCTTCTCAGTGGCATTCTCACCCTCTCCTTCGTCCTCCATTTTGTCACAAACGTCTATGACCTCTTTAATATCGGTTGAGGAAACCACCTCAAGTGCTGTCTCCTCAACAATTGTTTCAGCTAATTCAATCTCTACATCCAACCCTCTTAATTGGATCTCATGATCAGTGACATTGGTTGAGTCCATTTCAAGCCCTTGATCAACAATTACTTGAGCAGACTTTAACGCTGCATCCGCCACTTGTACTATAATCTCGTGATCATCAGTTGAGCCCACCTCACGGGTTGTCTTAACATTTGCTTCATCTGATTCAATCTCAGTGTTCACCTGTTGTAATAGAATCTTGTGATCATTTGCATCAGATGAGCCCTCTTCAAGCACTATCTCATCAATTTCTTCAGCTGACTTTAGCTCTGCATCCGTCACTTGTACTTGGATCACATGGCCATCAACAAACTGTGCTGAAGGCACATTCTTCATCACAACCATGTCCTCTACCTTTAGTGTCTGAACCATAGCAGAGCATATGAGTGGTCTTAGAGCACCCAAAGGATATTTCTTCTCTGGGGATTCTACTTCAGGTGCCACTACAGCAATCAAAGTTTTCAGAACGTCCTTTCCTTCAACCTGAGCTTCTTCTGAATTAACGGTGGTGACAAGTACTGGTCTTGCTTCTTCAAGTGGTCTTAGAGAACCCACAGGATCCCTTTTCTCTGGGGATTCTACTTCAGGTGTCACTATGGCAATCAAACATTCCAGAACGTCAGATGGTTCCGACATTGAAACGTCATGCATTGCAGCTGTGACATCTTGAACCTCACATGTGATTGTTTCTATAACTGGTGCATTCTCATTGTCTGCAGCATCCTCCGCAACATCCAGGAATTCCGCTTTTTCTTCAAGAGTGAGAGGTTGTATGGAGATAAGTTTGTCTGTGACTGATACATCCAGACTCTCTGTATCAGGCTGTGGAGTTTCTTCTGCTACCACCTTTTCGTCAACCTGAGCTACACCTTCTTCTGAACTAATGTAGGCTACAAGTTCTGGTCTTGCCTCTTCTAACTCATTTACCAATTCTGTTTGTGGGTCCTTTTCAGTTTCTATGCGTATGATTGGAATTGATTCATCTTCAGCTTTGTGTAAATCATCTGTAGTGATTCTTGCAGCATCAGACTCTTCAGTGTCCTCAGGTGCCAACTCTGTGTGTACTACCTCAGTGACCTCAGATGGACACTCTACCATAGGAGTCACTGGGCTTTTATCAACAAGATCAATTTGTTGAGACTCTTCACCTGTGCGGATTTCAACTGCATCTGATTTTTCATGAGCTATCAAAACTGTTGCTTCCTTCTCTTTTGGTGTGTGTAATATTTGTGGAGAAACTGAAATAGCTTCCAGATGTGGGCCTTTTCTATTTACCAATGAGAGAGTTTGGGTTCTGCTAATGGTATCAACAGTCTCATGCAGAAGTAACTCTGTATCCTTTAACTCGTATTCTATTGGGACAGGTGTTGTGCTGCCTGATGTTTTGGGGGACTCATCTGTCAGCTGTGACACTGCTGAAACCATTTCTGTTGTTTCTTCATCTAGAGGTTCTGGGGCAGTGACTGCTTCAGATGTCAACTCTATTAGGTCCTCGGCTATGGTATCGTCTTGAGTGGCTTCTTCAGGAGTAGACACTTCTTCAGGTATATCACTGAGTTGCTGATGTTTACTTATGAATTCCGTAAGGTCCTCAAAGTTTTCCATAGCAGTGGGGGATGTTGATGGGGCCAACTGTTCCACAGTATATTTGGCTTGAGCCTTTTCTGCTTCAGTGGGCAGGGTGTCTTTGGGTATGGTCGATTTGGTGAAAGTGCTAGAGACGTCTGGCTGGGTTTCTTCTTCTGTTATGTGTAATAGAGTTTCTATAACAGCCTCAGTTGATATGTTGTGTTTCTCTCCTAGCTCTTCTGCATCAAACTCTGACATGGGGACCACTGCTGGCGTTTCAGAGTCCTCCTCATCGTCCGATCCAACACCCATATCTGCCTTGTCAGAAGAGATTGGTTCCTGCTTTTCTCCATGCTTTCCCTTTTTGCGTCCAGGGATGAGTTTCTTTAGAGAAAAAGAAGACTTCTCTTTGGTGATTTCGATGCCAGATTGCATCTGCTCTGGTGAGTTAACTTTGACGGCCTCCTCGGTTTTTGCCTTTGTTTTTGAGGTGATCAGCTTTTTAAGGTATTTCCATGTAGACACCCCTTCACTCCCCGAGGGACTTCCAACTTGCTCAGGGGAAGAGGTAAAATGTTCATAACCTCTCTCCTGAGAACTGTCCAATGGCAACGCTGCAGTGTTTCCTGGTTCGCTTAGTATTTTACCTTCATTCATGGGTGCTTGCTCCTCTGAGTCCGATGTTTTTCTGCCCCTCCTCTTTGCAGATCCACATAGGAAAGCCTCCCAAGAAACAGATATATCAACCTTTTTTTGGGGCTCTTCTGTGATATGTTCTAGTACCTGTTCCCCTTCACTTTGCTTTGGCTCCTCATGTAAGCCTACAAGTGCTGACTCATCCTCACTCTCAGAGGATCTTTTGAGATGTCTTTTAGGTGTCATTCGTTTTTTGAAGGAAGTCCAGGTACCATCCTTCTTCCTTTCACTGTCAGAGGTTACATCATCTGATTCGTGGCTCAACCCAGCCTGAGCAGACACATTTACCTGCTCTGCTGATAATTCTTCTGGCAGAGAGGCAGTACTTTCTCCTTTCTGGTACTCCACTGAATCTGTGGATGACAGTAGATCCTCAGTTACATGCTCACCAGATCCAGTCAACTTGTCTGGTTTACTACCTCTCCGCTTCCTAGTAAGCTTCTTCAAACCAGCCCCAGACAAGAGCTTCCTCAGTGGACTTCCTTGATTTTTAGCTTTCTCTTGTGAGCTAAGAAGTTCTGCTTCATTTGAGATAACTGTGTGGAATCCCCAAGAAGAAGACTGCTTGTCAATAATATCCTGGACTGGACTTCCTTGGGTTTTAGCTTTCTCTTGAGAGTTAAGAAGTTGAGCCTCATTTGAGGTAACTGTCAGTAATACCACAGGAGCTGGCTCCTCTTCAGGAACATCCTCTGTGACTGTGACAAATCCCCAAGAATGAGACTGCTCTTCAAGACCTTCCTGTGTTTTAACTTTGTTTTGAGAGCTAAGAAGTTTGGCTTCATTTGTTTCAACTTTATTTGTTATAACGGTTACGAAACTCCAAGAAGGACACAGGTCTTCAAGAATATCCTGGACTGAACTTCCTGACCTAAGAAGTTCAGCTTCATTTGAGATAATTGTCTGTAATATATTAGTAGCTGTCTGTTCTTCAAGAACATCCTCTCTGTTTCCACTACTTTTAGAGACATTACTCTTAATGAGTTCGGGGACATTGGATGCCTCAGCCATTAGGGAATCTGTTACTCCGGCTAACATTGTGGCTGCAATTTCAAATTGAAGTTCTTTCTCATTTTGTTCCCCCTCAACACCTGGACTGATCTCCTCTTTTGTTTGTTCTTGTTCAAGTCCAGCTTCCTCTGCTGTGTTTATGTCCTCCTGTTTTTCAATGCTTTGCAGTTCCTGTTCCTTCTCAACGGTCGCATATTCGGGCGTTTCCTCTTCTATAAGctttttatttttctttaaaCCGACAAAGATTCCAGTAGTGAAAAACTTCTTAATTGGGGATATAATTTGTTCTTCAACATCCAGAATGGTTGCTGGTGCCTCTGTCTCTTCGGTTGGGAAGACTtcctcctctactttctccttGACTTTGTCCTTAGATTTCTCATTGACTTCTTCCTTTGGTTCCTCTTTGGGTTCATCCTTGGGTTCGGTCTTGTATTCTTTTGTGGGTTCTTGATTAACCTGCTTGTGTATTTTTCCTGTCAGGAAAAAATGTTTCAATGGAGACATTTCGTCAACTACCGGAACCAGTGGGGCTggtgcctctgcctctctctctacttttgcCACTTCTTCAGGTGTGACTTCCTCCTTAGGTTCTATCATTTCTATGGTATGTTCCTTGGTGGTTTTATAGAGAAAATGTCACAAATGTGAGGTCTGTCATCATATGGCAAGAGGTACAATCATCAGCAGGTTCCTCTGTTGTGTCATCAACAACCTCATTTGGTGCATCGTCGATATGCGCTTCTTCTAGTGTAtcatctagaagctctttttgtGTATCATCAGTAGGCTCATCTGGTATATCATCAGCAGGCTCTTTTAGTATTTCGTCAACCAGTGTTTCTAGTGTAtcATCAGTAGGCTCATCTGGTATATCATCAGCAGGCTCTTTTAGTATTTCGTCAACCAGTGTTTCTAGTGTAtcatctagaagctctttttgtGTATCGCCAACAGACTCTTTTGGTGTATCaccaacaatttattttattgtatCATCAGTCAGATCTGCTCTGCTCGGTATTCTCCTCAGCATTATCTATAGTGGTCTCTTTTGTGTCCTTGATATCCTCAGGAGTTACTGCTTCGCCATCTACTTTCTTAGGGCTCACGTCTTCTTGTGTTGTGTCAGTCTTTTTTCAATGTAAATTTTAAACCAATTGAActgaagaatttttaaaaacgTTCATTGACTTAATTTAATTTAACTTCTGTTTCAGTCTCATTTGTTGATGCCTCATCGTCTGCATCTGGTGATTCCTTCCCATCACATTTTCCAGAGGTGGTATATTCTCTGTGAGAGTCTCTATCGTCTCCGGAATGTCCTTATCCTGAGAAATG

Function

NR:

description
A-kinase anchor protein 12-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1841799 True 5964 TUCP 0.43 2 27195748 27201735

Neighbor

gene id symbol gene type direction distance location
LOC110497591 LOC106603863 coding downstream 22564 27168907 ~ 27173184 (-)
LOC110497590 stx11 coding downstream 34733 27155132 ~ 27161015 (-)
trnal-uaa-59 NA coding downstream 42048 27153618 ~ 27153700 (-)
LOC110498695 NA coding downstream 56291 27131709 ~ 27139457 (-)
shprh shprh coding downstream 283280 26887874 ~ 26912468 (-)
syne1b LOC106603506 coding upstream 11549 27213284 ~ 27350889 (-)
ahi1 ahi1 coding upstream 194115 27395850 ~ 27414739 (-)
LOC110497599 LOC106603601 coding upstream 223091 27424826 ~ 27440075 (-)
LOC110497600 LOC100196682 coding upstream 239165 27440900 ~ 27448264 (-)
trnaa-agc-7 NA coding upstream 310416 27512151 ~ 27512223 (-)
G1608904 NA non-coding downstream 130271 27063727 ~ 27065477 (-)
G1608863 NA non-coding downstream 157973 27035302 ~ 27037775 (-)
G1608712 NA non-coding downstream 232449 26698692 ~ 26963299 (-)
G1608804 LOC106603381 non-coding downstream 338259 26856243 ~ 26857489 (-)
G1608763 NA non-coding downstream 428589 26766851 ~ 26767159 (-)
G1609001 NA non-coding upstream 30556 27232291 ~ 27291107 (-)
G1609062 NA non-coding upstream 182742 27384477 ~ 27387965 (-)
G1609081 NA non-coding upstream 216207 27417942 ~ 27418188 (-)
G1609082 NA non-coding upstream 216672 27418407 ~ 27418633 (-)
G1609103 NA non-coding upstream 270024 27471759 ~ 27472034 (-)
G1608844 LOC106603413 other downstream 254368 26937870 ~ 26941380 (-)
G1608576 NA other downstream 584765 26584938 ~ 26610983 (-)
G1608529 NA other downstream 768445 26424031 ~ 26427303 (-)
ston2 ston2 other downstream 1362371 25825790 ~ 25876073 (-)
G1608992 NA other upstream 4495 27206230 ~ 27207354 (-)
nkx2.9 nkx2-8 other upstream 676726 27877963 ~ 27879920 (-)
plekhh1 LOC106602716 other upstream 1034861 28205649 ~ 28269202 (-)
crip1 crip1 other upstream 1440553 28642288 ~ 28650251 (-)
mideasb elmsan1 other upstream 1522520 28704168 ~ 28735490 (-)

Expression


Co-expression Network