LOC110498764


Basic Information

Item Value
gene id LOC110498764
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 19901163 ~ 19903369 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110498764
atgggttCGAACCCCTGGTTCCAAACCTCCGTCAATAACAgccagttttcagttttcccctcccacaATCCCAGTAAGGTCTGCACCCCCCCAGTCTCTGTCTGTGCCGTGGCTGACCCTGGCTGGTGGAAGCTGACCTTCTCAAGCAAGAAGTCTGAGGTCAAGGTTCTGTACAAGATCCCCCCCCTGAGTATGGCAATAACACTGGGAATAAAAAGCATTCCAACAGCTCTAAGATCCCCACAGACAACCAGTTCAGTGCCAGACTGGAGAAGATAGTTGATAAGTCGGTCCCTGAAGGGCGCCATGTTAAGGTATCCCACGCTGGTCGCTTCAAGAAGATCCGTGCCACACTGGCTGAGAACCCAATGTTGTCCCCTGAACATGGTCTTAGTGATGAGAACCACAGGGCAGAGAAATAACATACATAACGCATGTGcatgcgcacacatacacacaggcaagTGCATATCAATACCTATGAACAAcaaacagccacaccattcacaAAAACGCAGCAATCTTATTCGcacaaaacatatatatacacTCCCAATGTGGACACCACACTCAAGTACACCGATAATACTGTTACCATCTAAATTCTCACTCACACCCATATAAACAATACTGTTCAAGGTTCTTGATGCACAGACATATTAGAATGTGTGGTATCTTTGTGTGGATAGCAAAGTACCTTCAACAGTTAATTCCTGTGAGCATTGCACTTTTCAAGACGGCAACAAAGTACGGCAACAAATATGTTGCCTGTGTCTGAGCAAGGGCTcatgaacatacagtgccttgcgaaagtatttgacccccttgaacttt

Function

NR:

description
PREDICTED: proline-rich protein 15-like protein B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110498764 True 834 mRNA 0.46 3 19901163 19903369

Neighbor

gene id symbol gene type direction distance location
LOC110499126 cbx1 coding upstream 14772 19878973 ~ 19886391 (+)
LOC110498765 LOC106589283 coding upstream 59074 19797750 ~ 19842089 (+)
LOC110498767 NA coding upstream 139601 19758888 ~ 19761562 (+)
LOC110499129 LOC106589284 coding upstream 169802 19728772 ~ 19731361 (+)
LOC110499130 LOC106589285 coding upstream 172539 19726589 ~ 19728624 (+)
LOC110498763 NA coding downstream 11095 19914464 ~ 19915261 (+)
LOC110499123 LOC106589291 coding downstream 12603 19915972 ~ 19938321 (+)
LOC110499120 LOC106589294 coding downstream 269045 20172414 ~ 20291141 (+)
LOC110499117 LOC106589296 coding downstream 405379 20308748 ~ 20314910 (+)
LOC110499115 LOC106589298 coding downstream 416115 20319484 ~ 20369276 (+)
G1670894 NA non-coding upstream 22474 19878400 ~ 19878689 (+)
G1670801 NA non-coding upstream 155509 19745433 ~ 19745654 (+)
G1670783 NA non-coding upstream 180091 19720785 ~ 19721072 (+)
LOC110499131 NA non-coding upstream 183158 19712507 ~ 19718036 (+)
G1670904 NA non-coding downstream 3437 19906806 ~ 19907730 (+)
G1671244 NA non-coding downstream 609651 20513020 ~ 20513264 (+)
G1671247 NA non-coding downstream 613945 20517314 ~ 20517532 (+)
G1671251 NA non-coding downstream 618212 20521581 ~ 20521797 (+)
G1671252 NA non-coding downstream 618446 20521815 ~ 20522112 (+)
LOC110499153 LOC106589263 other upstream 775927 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 1779996 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 2121789 17717036 ~ 17812707 (+)
G1671091 NA other downstream 324426 20227795 ~ 20228168 (+)
G1672918 NA other downstream 1186034 21089403 ~ 21089830 (+)
G1672973 NA other downstream 1237156 21140525 ~ 21191078 (+)
G1673044 NA other downstream 1393003 21296372 ~ 21296854 (+)
G1673063 NA other downstream 1413429 21316798 ~ 21317412 (+)

Expression


Co-expression Network