plaub (plau)


Basic Information

Item Value
gene id plaub
gene name plau
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 39110890 ~ 39118850 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036956326.1
CAGAGAAACATTTTGCCCTTCCGTGAGATCCGAGGAGTACTACTGAGAAACACTGCAAGTCCTGAACCACACGATTTCTCCAAACTCTTTGTGCAAGAAGTACAATAGATACTTtacccaacagagagagagagagatgggaaggagtATTTTGCTGCTGATTTTGACATCCACCCTGGCAGGGGTGTCACAGAGTGAGACGGGCTTGCTGAGACAGAAAAGACAGATTTCTAATTTCCCCTACCGAAAAAGATCAGGTGGCCTCTGTCGTCATGGTGGCACCTCTGTCCCTGCCCTGTCCGGAGAACACATGTTCTGCTTATGCACAGTTGGTTACGGTGGCAAACACTGTGAGTTAGATACAGCAGCCGCCTGCTACACGGGAACTGGGATGTACTACAGAGGCAAAGTGTCTCAGTCAGAGAGTGGGCGCAGGTGTGTGGGGTGGGACCTGGACACCAGAAAACGCCTGATGGGGTCTGACGTCTACTCCGGGAGGCACAACTACTGCAGGAATCTGGAGTACAAACGTCGTCCGTGGTGTTATGTAATGAAGGGTGTGGAGCAGGTACAGGAATACTGTGATATCCCTCGCTGTGGCGTACCTGTGGAGACAGGTCCCCTTGATGATCTGCCCACCGAGCCCACTGTACCAGACACAGCGTCCAGCCTGACAGAGTCCACGTGTGGCCAGCGTACCAGGAAGCAGATGAAGATCGTAGGAGGGACAGTTGCCGCTGTGGAATCCCACCCGTGGATGGCTGCCATATTCTGGAGGAGCCGTCAGTCTAAAGAGAACGTGTTCCGCTGTGGGGGAAGTCTGATCTCTCCCTGCTGGGTTCTGTCTGCTGCCCATTGCTTCCCTGACAGCTCTCAAACTAAAGCCTGCAGCCTCTTCGTCACTCTGGGGAAGAGTGCCATCAATGAGACTGATGACACCAAAGAACAGACCTTTCAGGTGGAAGAGGTCATCGTGCACGCAGAGTTCGAAAACAGCGAAGGCAACTTCAACAATGACATCGCTCTACTGAAGTTAAAGGCTGTAGATGGTCGGTGTGCAGTGGagagcagctctgtcaggactgTCTGCCTGCCCCCGGCACGCCAGGCCCTCGGCGCGGGATCCTCCTGTGAGATAGCAGGCTACGGAAGACAGAACGAGGGTTTATGGTACAATTCACAGTACCTGAGGGAGGCAACGGTAAACATTTTGGCCCATGACGTCTGCTCAGATAAGGCGTACTACGGAAACCTGATCACAGAAAACATGTTCTGTGCTGGGAGACCGGACTGGAGTCAAGATGCGTGCAAGGGTGATTCCGGAGGACCCATGGTGTGCGAGGTGGATAATCGAATGTTCCTTTTTGGAATCGTCAGTTGGGGCGAGGGGTGTTCTAGAGCCTTACGACCAGGCGTGTACACAGCAGTGACCAACTACAACAAGTGGATAGAAGAAAAAACAGGCTTATCCTCCGTCGCCTCAGGGTCTATGTACCCACAGAAATGACCTCCTCGGGGTCTATGTACCCACTGAAATGACCTCCTCGGGGTCTATGTACCCACAGAAATGACCTCCTCGGGGTCTATGTACCCACAGAAATGACCTCCTCGGGGTCTATGTACCCACAGAAATGACCTCCTCAGGGTCTATGTACCCACATAAATAACCTCCTTAGGGTCTGTTATAGACACTATATCATGTTGTATAATTGTACATATAGGAATATAAGTATTTTAACTACTgaaatgtaaacatatttttGTACTTCTGTCTTTTTCAAAAAGGGGCAACAATAAATAATTTTTATATTACTCA
>XM_036956327.1
CAGAGAAACATTTTGCCCTTCCGTGAGATCCGAGGAGTACTACTGAGAAACACTGCAAGTCCTGAACCACACGATTTCTCCAAACTCTTTGTGCAAGAAGTACAATAGATACTTtacccaacagagagagagagagatgggaaggagtATTTTGCTGCTGATTTTGACATCCACCCTGGCAGGGGTGTCACAGAGTGAGACGGGCTTGCTGAGACAGAAAAGACAGATTTCTAATTTCCCCTACCGAAAAAGATCAGGTGGCCTCTGTCGTCATGGTGGCACCTCTGTCCCTGCCCTGTCCGGAGAACACATGTTCTGCTTATGCACAGTTGGTTACGGTGGCAAACACTGTGAGTTAGATACAGCAGCCGCCTGCTACACGGGAACTGGGATGTACTACAGAGGCAAAGTGTCTCAGTCAGAGAGTGGGCGCAGGTGTGTGGGGTGGGACCTGGACACCAGAAAACGCCTGATGGGGTCTGACGTCTACTCCGGGAGGCACAACTACTGCAGGAATCTGGAGTACAAACGTCGTCCGTGGTGTTATGTAATGAAGGGTGTGGAGCAGGTACAGGAATACTGTGATATCCCTCGCTGTGGCGTACCTGTGGAGACAGGTCCCCTTGATGATCTGCCCACCGAGCCCACTGTACCAGACACAGCGTCCAGCCTGACAGAGTCCACGTGTGGCCAGCGTACCAGGAAGCAGATGAAGATCGTAGGAGGGACAGTTGCCGCTGTGGAATCCCACCCGTGGATGGCTGCCATATTCTGGAGGAGCCGTCAGTCTAAAGAGAACGTGTTCCGCTGTGGGGGAAGTCTGATCTCTCCCTGCTGGGTTCTGTCTGCTGCCCATTGCTTCCCTGACAGCTCTCAAACTAAAGCCTGCAGCCTCTTCGTCACTCTGGGGAAGAGTGCCATCAATGAGACTGATGACACCAAAGAACAGACCTTTCAGGTGGAAGAGGTCATCGTGCACGCAGAGTTCGAAAACAGCGAAGGCAACTTCAACAATGACATCGCTCTACTGAAGTTAAAGGCTGTAGATGGTCGGTGTGCAGTGGagagcagctctgtcaggactgTCTGCCTGCCCCCGGCACGCCAGGCCCTCGGCGCGGGATCCTCCTGTGAGATAGCAGGCTACGGAAGACAGAACGAGGGTTTATGGTACAATTCACAGTACCTGAGGGAGGCAACGGTAAACATTTTGGCCCATGACGTCTGCTCAGATAAGGCGTACTACGGAAACCTGATCACAGAAAACATGTTCTGTGCTGGGAGACCGGACTGGAGTCAAGATGCGTGCAAGGGTGATTCCGGAGGACCCATGGTGTGCGAGGTGGATAATCGAATGTTCCTTTTTGGAATCGTCAGTTGGGGCGAGGGGTGTTCTAGAGCCTTACGACCAGGCGTGTACACAGCAGTGACCAACTACAACAAGTGGATAGAAGAAAAAACAGGCTTATCCTCCGTCGCCTCAGGGTCTATGTACCCACTGAAATGACCTCCTCGGGGTCTATGTACCCACAGAAATGACCTCCTCGGGGTCTATGTACCCACAGAAATGACCTCCTCGGGGTCTATGTACCCACAGAAATGACCTCCTCAGGGTCTATGTACCCACATAAATAACCTCCTTAGGGTCTGTTATAGACACTATATCATGTTGTATAATTGTACATATAGGAATATAAGTATTTTAACTACTgaaatgtaaacatatttttGTACTTCTGTCTTTTTCAAAAAGGGGCAACAATAAATAATTTTTATATTACTCA

Function

symbol description
plau Predicted to enable serine-type endopeptidase activity. Involved in several processes, including plasminogen activation; regulation of cell adhesion mediated by integrin; and regulation of smooth muscle cell-matrix adhesion. Acts upstream of or within positive regulation of cell migration. Located in cell surface and extracellular space. Implicated in several diseases, including Alzheimer's disease (multiple); Quebec platelet disorder; end stage renal disease; lung disease (multiple); and mitral valve prolapse. Biomarker of several diseases, including appendicitis; carcinoma (multiple); chronic obstructive pulmonary disease; end stage renal disease; and hepatitis B.

NR:

description
urokinase-type plasminogen activator

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008236 serine-type peptidase activity molecular_function

KEGG:

id description
K01348 PLAU; urokinase plasminogen activator

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036956326.1 False 1816 mRNA 0.51 12 39110890 39118850
XM_036956327.1 True 1784 mRNA 0.51 12 39110890 39118850

Neighbor

gene id symbol gene type direction distance location
LOC110499463 LOC106589886 coding upstream 42752 39057036 ~ 39068138 (+)
LOC118942016 NA coding upstream 470241 38639595 ~ 38640649 (+)
LOC110499544 mkk6c coding upstream 472118 38594819 ~ 38638772 (+)
LOC110499600 NA coding upstream 516585 38580735 ~ 38594305 (+)
LOC110499447 LOC106589900 coding upstream 906920 38083895 ~ 38203970 (+)
LOC110499465 LOC106589883 coding downstream 5228 39124078 ~ 39196200 (+)
LOC118942069 NA coding downstream 25106 39143956 ~ 39150402 (+)
LOC118942017 NA coding downstream 298019 39416869 ~ 39418951 (+)
LOC110499546 LOC106589879 coding downstream 397689 39516539 ~ 39618380 (+)
LOC110499467 LOC106589877 coding downstream 552200 39671050 ~ 39678438 (+)
G1692829 NA non-coding upstream 41770 39027006 ~ 39069120 (+)
G1692870 NA non-coding upstream 50784 39059494 ~ 39060106 (+)
G1692860 NA non-coding upstream 70849 39038618 ~ 39040041 (+)
G1692851 LOC106589887 non-coding upstream 84384 39019155 ~ 39026506 (+)
G1692850 NA non-coding upstream 94162 39016074 ~ 39016728 (+)
G1692906 NA non-coding downstream 20152 39139002 ~ 39139289 (+)
G1692913 NA non-coding downstream 39897 39158747 ~ 39159276 (+)
G1692916 NA non-coding downstream 53680 39172530 ~ 39175253 (+)
G1693053 NA non-coding downstream 102694 39221544 ~ 39221809 (+)
G1693062 NA non-coding downstream 116592 39235442 ~ 39235657 (+)
G1692702 NA other upstream 270619 38839934 ~ 38840271 (+)
G1692568 NA other upstream 398599 38710951 ~ 38712291 (+)
G1692406 NA other upstream 541444 38568269 ~ 38569446 (+)
G1691992 NA other upstream 882339 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 888155 38222505 ~ 38222735 (+)
G1693184 NA other downstream 237495 39356345 ~ 39359635 (+)
G1693699 NA other downstream 762499 39881349 ~ 39881843 (+)
G1693700 NA other downstream 763108 39881958 ~ 39882625 (+)
G1693914 NA other downstream 1092672 40211522 ~ 40212953 (+)
G1695272 NA other downstream 2499177 41618027 ~ 41618505 (+)

Expression


Co-expression Network