G1668458


Basic Information

Item Value
gene id G1668458
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16342817 ~ 16343048 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1909001
actAACTGGAAATTTTTAGGTACTAACTCCACATGTTTTCAGAGTAGAACATTAATGTAAGATATGTTTCTTAATTTGTAGCATTATGTGGCGATTTATTTTCATATATCCACGTTGCAGTGCTTCATAAAGCAAACTCAGCCTTGTTAGGTGGATTGTCAAATTGGAGTTGTTGTCTAGTTTTTTAAAACCATATGACCTGATTAGAAAGAAtctggtcccatcatagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1909001 True 232 lncRNA 0.34 1 16342817 16343048

Neighbor

gene id symbol gene type direction distance location
LOC110499058 LOC106589328 coding upstream 36189 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 coding upstream 206853 16134445 ~ 16135964 (+)
LOC110499053 LOC106589333 coding upstream 256909 16082734 ~ 16085931 (+)
LOC110499051 LOC106589335 coding upstream 586645 15753278 ~ 15756172 (+)
LOC110499048 LOC106589221 coding upstream 705708 15630588 ~ 15637109 (+)
LOC110499059 LOC106589326 coding downstream 6928 16349976 ~ 16448699 (+)
LOC110498755 LOC106589324 coding downstream 193613 16535724 ~ 16540437 (+)
LOC110499586 LOC106589323 coding downstream 197894 16540942 ~ 16545004 (+)
LOC110499061 grn coding downstream 217800 16560848 ~ 16592647 (+)
LOC110499062 arf1l coding downstream 262003 16605051 ~ 16611216 (+)
G1668457 NA non-coding upstream 198 16342200 ~ 16342619 (+)
G1668456 NA non-coding upstream 976 16341613 ~ 16341841 (+)
G1668454 NA non-coding upstream 2249 16340353 ~ 16340568 (+)
G1668453 NA non-coding upstream 4803 16337622 ~ 16338014 (+)
G1668445 NA non-coding upstream 6331 16335661 ~ 16336486 (+)
G1668821 LOC106573797 non-coding downstream 109941 16452989 ~ 16453404 (+)
G1668836 NA non-coding downstream 143057 16486105 ~ 16486380 (+)
G1668860 NA non-coding downstream 204335 16547383 ~ 16548670 (+)
G1668867 NA non-coding downstream 271688 16614736 ~ 16614969 (+)
G1668923 NA non-coding downstream 272752 16615800 ~ 16616015 (+)
G1667601 NA other upstream 1001633 15339612 ~ 15341184 (+)
G1666308 NA other upstream 1556897 14785592 ~ 14785920 (+)
G1666194 NA other upstream 1718603 14601321 ~ 14624214 (+)
LOC110498756 LOC106589319 other downstream 315226 16657491 ~ 16706241 (+)
LOC118941995 LOC105021261 other downstream 1110439 17453487 ~ 17457043 (+)
G1670091 NA other downstream 1229783 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 1373988 17717036 ~ 17812707 (+)

Expression


Co-expression Network