G1668821 (LOC106573797)


Basic Information

Item Value
gene id G1668821
gene name LOC106573797
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16452989 ~ 16453404 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1909395
gtcccgcaggtgtgatgttcggatgtaccaatcctgtgtaggtgttgttacacatggtctgccactgcgagggcgatcagctgtccgtcctgtctccctgtagcgctgtcttaggcatctcacagtatggacattgcaatttattgccctggccacatctgcagtcctcatgcctccttgcagtatgcctaaggcacgttcacagagatgagcagggactgtgggcatctttcttttggtgtttttcagtcagtagaaaggcctctttagtgtcctaaattttcataactgtgaccttaattgcctaccgtctgtaagctgttggtgtcttaaagaccgttccacaggtgcaagttcattaattgtttatggttcattgaacaagcatgggaaacagtgtttaaaccctttacaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1909395 True 416 lncRNA 0.47 1 16452989 16453404

Neighbor

gene id symbol gene type direction distance location
LOC110499059 LOC106589326 coding upstream 4290 16349976 ~ 16448699 (+)
LOC110499058 LOC106589328 coding upstream 146361 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 coding upstream 317025 16134445 ~ 16135964 (+)
LOC110499053 LOC106589333 coding upstream 367081 16082734 ~ 16085931 (+)
LOC110499051 LOC106589335 coding upstream 696817 15753278 ~ 15756172 (+)
LOC110498755 LOC106589324 coding downstream 83257 16535724 ~ 16540437 (+)
LOC110499586 LOC106589323 coding downstream 87538 16540942 ~ 16545004 (+)
LOC110499061 grn coding downstream 107444 16560848 ~ 16592647 (+)
LOC110499062 arf1l coding downstream 151647 16605051 ~ 16611216 (+)
grb7 LOC106589320 coding downstream 168367 16621771 ~ 16637170 (+)
G1668458 NA non-coding upstream 109941 16342817 ~ 16343048 (+)
G1668457 NA non-coding upstream 110370 16342200 ~ 16342619 (+)
G1668456 NA non-coding upstream 111148 16341613 ~ 16341841 (+)
G1668454 NA non-coding upstream 112421 16340353 ~ 16340568 (+)
G1668453 NA non-coding upstream 114975 16337622 ~ 16338014 (+)
G1668836 NA non-coding downstream 32701 16486105 ~ 16486380 (+)
G1668860 NA non-coding downstream 93979 16547383 ~ 16548670 (+)
G1668867 NA non-coding downstream 161332 16614736 ~ 16614969 (+)
G1668923 NA non-coding downstream 162396 16615800 ~ 16616015 (+)
G1668926 yo84 non-coding downstream 165008 16618412 ~ 16618683 (+)
G1667601 NA other upstream 1111805 15339612 ~ 15341184 (+)
G1666308 NA other upstream 1667069 14785592 ~ 14785920 (+)
G1666194 NA other upstream 1828775 14601321 ~ 14624214 (+)
LOC110498756 LOC106589319 other downstream 204870 16657491 ~ 16706241 (+)
LOC118941995 LOC105021261 other downstream 1000083 17453487 ~ 17457043 (+)
G1670091 NA other downstream 1119427 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 1263632 17717036 ~ 17812707 (+)

Expression


Co-expression Network