G1668926 (yo84)


Basic Information

Item Value
gene id G1668926
gene name yo84
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16618412 ~ 16618683 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1909508
cacaggcttccaagggagggcaattttggggcttcatcatgtttcatcgaaatgtacagctgtgtatcgtccgcataaaagtgaaagttaacattatgtttccgaatgacatcaccaagaggtaaaatatatagtgaaaacaatattggtcctaaaatggaaccttgaggaacaccgaaatttacagttgatttgtcagaagacaaaccatccacagagacaaacggatatctttccgacagataagatctaaaccaggccagaactgtCCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1909508 True 272 lncRNA 0.40 1 16618412 16618683

Neighbor

gene id symbol gene type direction distance location
LOC110499062 arf1l coding upstream 7196 16605051 ~ 16611216 (+)
LOC110499061 grn coding upstream 25765 16560848 ~ 16592647 (+)
LOC110499586 LOC106589323 coding upstream 73408 16540942 ~ 16545004 (+)
LOC110498755 LOC106589324 coding upstream 77975 16535724 ~ 16540437 (+)
LOC110499059 LOC106589326 coding upstream 169713 16349976 ~ 16448699 (+)
grb7 LOC106589320 coding downstream 3088 16621771 ~ 16637170 (+)
LOC110498756 LOC106589319 coding downstream 38808 16657491 ~ 16706241 (+)
LOC100135885 LOC106589306 coding downstream 171130 16789813 ~ 16795054 (+)
LOC110499066 LOC106589302 coding downstream 194431 16813114 ~ 16822670 (+)
LOC110499069 LOC106589311 coding downstream 205803 16824486 ~ 16840335 (+)
G1668923 NA non-coding upstream 2397 16615800 ~ 16616015 (+)
G1668867 NA non-coding upstream 3443 16614736 ~ 16614969 (+)
G1668860 NA non-coding upstream 69742 16547383 ~ 16548670 (+)
G1668836 NA non-coding upstream 132032 16486105 ~ 16486380 (+)
G1668821 LOC106573797 non-coding upstream 165008 16452989 ~ 16453404 (+)
G1668930 NA non-coding downstream 19854 16638537 ~ 16638927 (+)
G1668935 NA non-coding downstream 29541 16648224 ~ 16648455 (+)
G1668936 NA non-coding downstream 33678 16652361 ~ 16652575 (+)
G1668937 NA non-coding downstream 35108 16653791 ~ 16654096 (+)
LOC110499058 LOC106589328 other upstream 312191 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 other upstream 482645 16134445 ~ 16135964 (+)
G1667601 NA other upstream 1277228 15339612 ~ 15341184 (+)
G1666308 NA other upstream 1832492 14785592 ~ 14785920 (+)
LOC118941995 LOC105021261 other downstream 834804 17453487 ~ 17457043 (+)
G1670091 NA other downstream 954148 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 1098353 17717036 ~ 17812707 (+)
G1670129 NA other downstream 1133611 17752294 ~ 17760812 (+)

Expression


Co-expression Network