G1668930


Basic Information

Item Value
gene id G1668930
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16638537 ~ 16638927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1909512
gcgtagtgtccagagcatggaggcgctactaggagacaggccagtacatcaggagacgtggaggaggccgtaggagggcaacaacccagcagcaggacccctacctccacctttgtgcaaggaggagcaggaggagcactgccagaatgacctccagcaggccacaaatgtgcatgtgtctgctcaaacggtcagaaacagactccatgagggtggtatgagggtccgacgtccacaggtgggggttgtgcttacagcccaacaccgtgcaggacgtttggcatttgccagagaacaccaagattggcaaattcgccactggcgccctgtgctcttcacagatgaaagctggttcacactgagcacatgtgacagtctggagacgccgtgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1909512 True 391 lncRNA 0.57 1 16638537 16638927

Neighbor

gene id symbol gene type direction distance location
grb7 LOC106589320 coding upstream 1367 16621771 ~ 16637170 (+)
LOC110499062 arf1l coding upstream 27321 16605051 ~ 16611216 (+)
LOC110499061 grn coding upstream 45890 16560848 ~ 16592647 (+)
LOC110499586 LOC106589323 coding upstream 93533 16540942 ~ 16545004 (+)
LOC110498755 LOC106589324 coding upstream 98100 16535724 ~ 16540437 (+)
LOC110498756 LOC106589319 coding downstream 18564 16657491 ~ 16706241 (+)
LOC100135885 LOC106589306 coding downstream 150886 16789813 ~ 16795054 (+)
LOC110499066 LOC106589302 coding downstream 174187 16813114 ~ 16822670 (+)
LOC110499069 LOC106589311 coding downstream 185559 16824486 ~ 16840335 (+)
LOC110499071 arl4d coding downstream 208523 16847450 ~ 16849896 (+)
G1668926 yo84 non-coding upstream 19854 16618412 ~ 16618683 (+)
G1668923 NA non-coding upstream 22522 16615800 ~ 16616015 (+)
G1668867 NA non-coding upstream 23568 16614736 ~ 16614969 (+)
G1668860 NA non-coding upstream 89867 16547383 ~ 16548670 (+)
G1668836 NA non-coding upstream 152157 16486105 ~ 16486380 (+)
G1668935 NA non-coding downstream 9297 16648224 ~ 16648455 (+)
G1668936 NA non-coding downstream 13434 16652361 ~ 16652575 (+)
G1668937 NA non-coding downstream 14864 16653791 ~ 16654096 (+)
G1669019 NA non-coding downstream 157228 16796155 ~ 16797220 (+)
LOC110499058 LOC106589328 other upstream 332316 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 other upstream 502770 16134445 ~ 16135964 (+)
G1667601 NA other upstream 1297353 15339612 ~ 15341184 (+)
G1666308 NA other upstream 1852617 14785592 ~ 14785920 (+)
LOC118941995 LOC105021261 other downstream 814560 17453487 ~ 17457043 (+)
G1670091 NA other downstream 933904 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 1078109 17717036 ~ 17812707 (+)
G1670129 NA other downstream 1113367 17752294 ~ 17760812 (+)

Expression


Co-expression Network