G1669029


Basic Information

Item Value
gene id G1669029
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 16844253 ~ 16844591 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1909619
GTAAAAACCCAGTTAAAGCCCGCTGAAGTTTTGTAGCGGAAACTGATGTCCAGTTTGTAAGACAGAAAAGCCTCTGATGATACTCTAATGGATGCCAATTTGATATCTGACCGTCGCATGCTACCCTTCACGGTCGCACTCAAACCACCTTCGGGGTGGCTGTGAACCCATTCATGTCAAAGTGAGGAAATTCGATGAAGCGGGGGTAAACGGCGGGACATAATTAAGAGTCTCTTCAGGTAGCCCAATGCCTCATCATCTAATTAGTGAcacgcatgaatggatgaacgagattcccactatCCCTACCTattatctagcgaaaccacagccaaggga

Function

NR:

description
Zgc:165536 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1909619 True 339 lncRNA 0.47 1 16844253 16844591

Neighbor

gene id symbol gene type direction distance location
LOC110499069 LOC106589311 coding upstream 3918 16824486 ~ 16840335 (+)
LOC110499066 LOC106589302 coding upstream 21583 16813114 ~ 16822670 (+)
LOC100135885 LOC106589306 coding upstream 49199 16789813 ~ 16795054 (+)
LOC110498756 LOC106589319 coding upstream 138012 16657491 ~ 16706241 (+)
grb7 LOC106589320 coding upstream 207083 16621771 ~ 16637170 (+)
LOC110499071 arl4d coding downstream 2859 16847450 ~ 16849896 (+)
LOC110499072 sost coding downstream 32860 16877451 ~ 16920896 (+)
LOC118942005 LOC106589179 coding downstream 157123 17001714 ~ 17006377 (+)
LOC110499073 LOC106578252 coding downstream 207571 17052162 ~ 17176942 (+)
telo2 telo2 coding downstream 343132 17187723 ~ 17204657 (+)
G1669022 NA non-coding upstream 42501 16801553 ~ 16801752 (+)
G1669019 NA non-coding upstream 47033 16796155 ~ 16797220 (+)
G1668937 NA non-coding upstream 190157 16653791 ~ 16654096 (+)
G1668936 NA non-coding upstream 191678 16652361 ~ 16652575 (+)
G1669054 LOC100194703 non-coding downstream 35681 16880272 ~ 16880602 (+)
G1669056 NA non-coding downstream 37337 16881928 ~ 16882141 (+)
G1669061 NA non-coding downstream 40295 16884886 ~ 16885119 (+)
G1669063 NA non-coding downstream 43797 16888388 ~ 16888694 (+)
LOC110498755 LOC106589324 other upstream 303816 16535724 ~ 16540437 (+)
LOC110499058 LOC106589328 other upstream 538032 16140837 ~ 16306628 (+)
LOC110499057 LOC106589330 other upstream 708486 16134445 ~ 16135964 (+)
G1667601 NA other upstream 1503069 15339612 ~ 15341184 (+)
LOC118941995 LOC105021261 other downstream 608896 17453487 ~ 17457043 (+)
G1670091 NA other downstream 728240 17572831 ~ 17577262 (+)
G1670125 LOC105007702 other downstream 872445 17717036 ~ 17812707 (+)
G1670129 NA other downstream 907703 17752294 ~ 17760812 (+)
G1670126 NA other downstream 922890 17767481 ~ 17773702 (+)

Expression


Co-expression Network