G1670116


Basic Information

Item Value
gene id G1670116
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 17688037 ~ 17693706 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1910822
ttttgtaagagtgcatcagaccaagctacttctattctgacatctattcagagtaggtgaataggacagtgtcaatatctcatatcatatagactttcagtcatctgaaaaggtgtagacattttacatcatcattccccttaagagcagtagcttgctactcactatggttttgctgtagcaggtggcagcttcctggtacttgcggcagaggaacagtcggttgccctgctccttcagctcctgtgctgtggaactcttctctgggctgctagccatcttctctggtggctctgcagcgcccgctgcgcactgtttccctatcctgttccccgtctctccggctggctagctgtcaggtgaaagaatggccctgttctttgtcttctcacaaactagaaaagaaagataggcagcatcagcaacagttgctgctgcgtgtggtgaggtgctgttgcaactcatacattgagccc

Function

NR:

description
hypothetical protein cypCar_00043709

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1910822 True 476 lncRNA 0.49 2 17688037 17693706

Neighbor

gene id symbol gene type direction distance location
LOC118942045 NA coding upstream 72587 17607281 ~ 17615450 (+)
LOC118942044 NA coding upstream 82871 17600129 ~ 17605166 (+)
LOC118942043 NA coding upstream 100850 17580590 ~ 17587187 (+)
LOC118942042 LOC105021261 coding upstream 192296 17484324 ~ 17495741 (+)
LOC118941996 LOC105021261 coding upstream 208106 17476413 ~ 17479931 (+)
LOC118942046 NA coding downstream 144387 17838093 ~ 17843090 (+)
LOC110499153 LOC106589263 coding downstream 1401176 19094882 ~ 19201695 (+)
LOC110499151 LOC106589264 coding downstream 1513546 19207252 ~ 19242695 (+)
LOC110499149 LOC106589267 coding downstream 1601417 19295123 ~ 19303669 (+)
LOC110499145 LOC106589268 coding downstream 1617664 19311370 ~ 19350990 (+)
G1670094 NA non-coding upstream 82317 17580653 ~ 17605720 (+)
G1670088 NA non-coding upstream 116384 17571382 ~ 17571653 (+)
G1670086 NA non-coding upstream 126355 17557055 ~ 17561682 (+)
G1670085 NA non-coding upstream 145569 17542213 ~ 17542468 (+)
G1670123 NA non-coding downstream 20842 17714548 ~ 17714916 (+)
G1670125 LOC105007702 non-coding downstream 23330 17717036 ~ 17812707 (+)
G1670128 NA non-coding downstream 32064 17725770 ~ 17734028 (+)
G1670127 NA non-coding downstream 54504 17748210 ~ 17756409 (+)
G1670158 NA non-coding downstream 122473 17816179 ~ 17816492 (+)
G1670091 NA other upstream 110775 17572831 ~ 17577262 (+)
LOC118941995 LOC105021261 other upstream 233943 17453487 ~ 17457043 (+)
LOC110498756 LOC106589319 other upstream 1001942 16657491 ~ 16706241 (+)
LOC110498755 LOC106589324 other upstream 1147600 16535724 ~ 16540437 (+)
LOC110499058 LOC106589328 other upstream 1381816 16140837 ~ 16306628 (+)
G1670129 NA other downstream 58588 17752294 ~ 17760812 (+)
G1670126 NA other downstream 73775 17767481 ~ 17773702 (+)
G1670209 LOC105007702 other downstream 357905 18051611 ~ 18132470 (+)

Expression


Co-expression Network