G1670159



Basic Information


Item Value
gene id G1670159
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 17828766 ~ 17833051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1910907
agcttacaatctggccaaggagcagagactgaactttggagacgacatcccgagtgccctgcgggtcgctaagaagaagcgctggaatagcattgaggagaagcgcatcaaccaggagaacaagctgcatgcatatctcccaaacttatcctagcagagaaggagagtttgtgagaagacaaagaacagggccattctttcacctgacagctagccagccggagagactgggaacaggatagggaaacagtgcgcagtGGGCGCtggagagccaccagagaag

Function


NR:

description
STIP1 homology and U box-containing protein 1-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1910907 True 283 lncRNA 0.53 2 17828766 17833051

Neighbor


gene id symbol gene type direction distance location
LOC118942045 NA coding upstream 213316 17607281 ~ 17615450 (+)
LOC118942044 NA coding upstream 223600 17600129 ~ 17605166 (+)
LOC118942043 NA coding upstream 241579 17580590 ~ 17587187 (+)
LOC118942042 LOC105021261 coding upstream 333025 17484324 ~ 17495741 (+)
LOC118941996 LOC105021261 coding upstream 348835 17476413 ~ 17479931 (+)
LOC118942046 NA coding downstream 5042 17838093 ~ 17843090 (+)
LOC110499153 LOC106589263 coding downstream 1261831 19094882 ~ 19201695 (+)
LOC110499151 LOC106589264 coding downstream 1374201 19207252 ~ 19242695 (+)
LOC110499149 LOC106589267 coding downstream 1462072 19295123 ~ 19303669 (+)
LOC110499145 LOC106589268 coding downstream 1478319 19311370 ~ 19350990 (+)
G1670158 NA non-coding upstream 12274 17816179 ~ 17816492 (+)
G1670125 LOC105007702 non-coding upstream 16059 17717036 ~ 17812707 (+)
G1670127 NA non-coding upstream 72357 17748210 ~ 17756409 (+)
G1670128 NA non-coding upstream 94738 17725770 ~ 17734028 (+)
G1670123 NA non-coding upstream 113850 17714548 ~ 17714916 (+)
G1670174 NA non-coding downstream 173194 18006245 ~ 18006459 (+)
G1670208 NA non-coding downstream 217011 18050062 ~ 18050619 (+)
G1670209 LOC105007702 non-coding downstream 242049 18051611 ~ 18132470 (+)
G1670215 NA non-coding downstream 250431 18083482 ~ 18089617 (+)
G1670216 NA non-coding downstream 267102 18100153 ~ 18108413 (+)
G1670126 NA other upstream 55064 17767481 ~ 17773702 (+)
G1670129 NA other upstream 67954 17752294 ~ 17760812 (+)
G1670091 NA other upstream 251504 17572831 ~ 17577262 (+)
LOC118941995 LOC105021261 other upstream 374672 17453487 ~ 17457043 (+)
G1671091 NA other downstream 2394744 20227795 ~ 20228168 (+)
G1672918 NA other downstream 3256352 21089403 ~ 21089830 (+)
G1672973 NA other downstream 3307474 21140525 ~ 21191078 (+)

Expression



Co-expression Network