G1670186


Basic Information

Item Value
gene id G1670186
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18752738 ~ 18753753 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1910944
atttctcccaacagatgtcaaagaaaagctcacacacacacctgttggatttttaaagtgtttacacctggcatttgccatatggcaaTCAACTTTGAACGAAACGACGCCGAATTGAGTTgtattggacaccgtgtatatggtttgtcaagtgccaatgacttcccattcatttttgtccatttcaggggggtgttcTCTTACAATACCTCTTGCTGAAATTTGTTGACAGTGTTCCTAACATCCCAAAAACGCAGGTGTGGACAAAATTTTACTTGCCAATTGCATCAAACATGttatagaccttgtttatggaaaagtgtctataactgtatttcaatgttgcaacttgctgaaaactgtccagtgttaatttcatctcaaatagacagcacaaaaAAAATTttcatccagagtgcatcaaacaagaatttagagcttgtttatggaaaagtggttatttctgttttttcaaCTTGCCGAAAACCGTCCAGTGTTCATTTCATCttaaatagacagcacagcaaacatgatttagagcttgtttatggaaaagtggttatttcaatgttgcaacttgctgaaaactgtccagtccaatcaatgagacaagatcagAGATGTTGGTtcgagctgccttgccctattaaAAAATCACAATTTAAGTTTGCTATTTACAAGAAGCATTGTCTTATGTGAAGAATGAATGTAAAGCTATCCGTCTGCCAATTGAAGCGCaaaagaagttgggtgatgcaacagaggacaatgacccaaaagacagaagtaaatcaacaacagaatggcttcaacagaagatgGCCCAGTCCCGACTTCCCGACTTTAAGCAGATTTAAAATGCTGTGACATGAAcccgagagcggttcacaccaggcATCCTACAAATAttgttgaactgaaacagtttggtAAAAGTgtatggtccaaaattcctcctgacctttgaaggtctgatccgcaactacagaaaactttCGGTTGAGGTTAATTGCTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1910944 True 1016 lncRNA 0.39 1 18752738 18753753

Neighbor

gene id symbol gene type direction distance location
LOC118942046 NA coding upstream 909648 17838093 ~ 17843090 (+)
LOC118942045 NA coding upstream 1137288 17607281 ~ 17615450 (+)
LOC118942044 NA coding upstream 1147572 17600129 ~ 17605166 (+)
LOC118942043 NA coding upstream 1165551 17580590 ~ 17587187 (+)
LOC118942042 LOC105021261 coding upstream 1256997 17484324 ~ 17495741 (+)
LOC110499153 LOC106589263 coding downstream 341129 19094882 ~ 19201695 (+)
LOC110499151 LOC106589264 coding downstream 453499 19207252 ~ 19242695 (+)
LOC110499149 LOC106589267 coding downstream 541370 19295123 ~ 19303669 (+)
LOC110499145 LOC106589268 coding downstream 557617 19311370 ~ 19350990 (+)
LOC118942048 NA coding downstream 622486 19376239 ~ 19378591 (+)
G1670187 NA non-coding upstream 112 18751460 ~ 18752626 (+)
G1670201 NA non-coding upstream 9751 18371226 ~ 18742987 (+)
G1670192 LOC105007702 non-coding upstream 26744 18703473 ~ 18725994 (+)
G1670273 NA non-coding upstream 52943 18693941 ~ 18699795 (+)
G1670264 NA non-coding upstream 216630 18532273 ~ 18536108 (+)
G1670369 NA non-coding downstream 190894 18944647 ~ 18944883 (+)
G1670371 NA non-coding downstream 192514 18946267 ~ 18946564 (+)
G1670378 NA non-coding downstream 297867 19051620 ~ 19051951 (+)
G1670375 NA non-coding downstream 298852 19052605 ~ 19052677 (+)
G1670209 LOC105007702 other upstream 631571 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 973364 17717036 ~ 17812707 (+)
G1670126 NA other upstream 979036 17767481 ~ 17773702 (+)
G1670129 NA other upstream 991926 17752294 ~ 17760812 (+)
G1670091 NA other upstream 1175476 17572831 ~ 17577262 (+)
G1671091 NA other downstream 1474042 20227795 ~ 20228168 (+)
G1672918 NA other downstream 2335650 21089403 ~ 21089830 (+)
G1672973 NA other downstream 2386772 21140525 ~ 21191078 (+)
G1673044 NA other downstream 2542619 21296372 ~ 21296854 (+)

Expression


Co-expression Network