G1670371


Basic Information

Item Value
gene id G1670371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 18946267 ~ 18946564 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1911175
ccacagttgatttcttcaaaccaagctgcttacctattgcaaattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttgtgactgtgaggttgtggacaggtgtcttttatactgataacaagttcaaacaggtgccattaatacaggtaatgaatgAGTTGAGgatagaggagcctcttaaagaagttacaggtctgtgagagccagaaatcttgcttgtttataggtgaccaaatacttattttcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1911175 True 298 lncRNA 0.42 1 18946267 18946564

Neighbor

gene id symbol gene type direction distance location
LOC118942046 NA coding upstream 1103177 17838093 ~ 17843090 (+)
LOC118942045 NA coding upstream 1330817 17607281 ~ 17615450 (+)
LOC118942044 NA coding upstream 1341101 17600129 ~ 17605166 (+)
LOC118942043 NA coding upstream 1359080 17580590 ~ 17587187 (+)
LOC118942042 LOC105021261 coding upstream 1450526 17484324 ~ 17495741 (+)
LOC110499153 LOC106589263 coding downstream 148318 19094882 ~ 19201695 (+)
LOC110499151 LOC106589264 coding downstream 260688 19207252 ~ 19242695 (+)
LOC110499149 LOC106589267 coding downstream 348559 19295123 ~ 19303669 (+)
LOC110499145 LOC106589268 coding downstream 364806 19311370 ~ 19350990 (+)
LOC118942048 NA coding downstream 429675 19376239 ~ 19378591 (+)
G1670369 NA non-coding upstream 1384 18944647 ~ 18944883 (+)
G1670186 NA non-coding upstream 192514 18752738 ~ 18753753 (+)
G1670187 NA non-coding upstream 193641 18751460 ~ 18752626 (+)
G1670192 LOC105007702 non-coding upstream 220273 18703473 ~ 18725994 (+)
G1670273 NA non-coding upstream 246472 18693941 ~ 18699795 (+)
G1670378 NA non-coding downstream 105056 19051620 ~ 19051951 (+)
G1670375 NA non-coding downstream 106041 19052605 ~ 19052677 (+)
G1670470 NA non-coding downstream 190789 19137353 ~ 19137566 (+)
G1670482 NA non-coding downstream 204981 19151545 ~ 19151833 (+)
G1670209 LOC105007702 other upstream 825100 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 1166893 17717036 ~ 17812707 (+)
G1670126 NA other upstream 1172565 17767481 ~ 17773702 (+)
G1670129 NA other upstream 1185455 17752294 ~ 17760812 (+)
G1670091 NA other upstream 1369005 17572831 ~ 17577262 (+)
G1671091 NA other downstream 1281231 20227795 ~ 20228168 (+)
G1672918 NA other downstream 2142839 21089403 ~ 21089830 (+)
G1672973 NA other downstream 2193961 21140525 ~ 21191078 (+)
G1673044 NA other downstream 2349808 21296372 ~ 21296854 (+)

Expression


Co-expression Network