G1670378


Basic Information

Item Value
gene id G1670378
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 19051620 ~ 19051951 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1911183
gaagagaccaaggcacagcgtgatatgaatacaacTTCTATTATTTAATGAAGAAACATATGAGCGGAACTACAAAACGAACTTGCCGCTATAACAAGTGCtaacacaggcaactacacatagacaataacccacaaaatacccaaagaagatggctgcctaaatatggttcccaattagagacaatgataaacagctgcctctaattgagaaccaatctaggcaaccatagacatacataaacacctagatagtaaattaccccataaacctacaaaacccctagacagtacaaaaacacatacatcacccatgtcacaccctgacctaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1911183 True 332 lncRNA 0.39 1 19051620 19051951

Neighbor

gene id symbol gene type direction distance location
LOC118942046 NA coding upstream 1208530 17838093 ~ 17843090 (+)
LOC118942045 NA coding upstream 1436170 17607281 ~ 17615450 (+)
LOC118942044 NA coding upstream 1446454 17600129 ~ 17605166 (+)
LOC118942043 NA coding upstream 1464433 17580590 ~ 17587187 (+)
LOC118942042 LOC105021261 coding upstream 1555879 17484324 ~ 17495741 (+)
LOC110499153 LOC106589263 coding downstream 42931 19094882 ~ 19201695 (+)
LOC110499151 LOC106589264 coding downstream 155301 19207252 ~ 19242695 (+)
LOC110499149 LOC106589267 coding downstream 243172 19295123 ~ 19303669 (+)
LOC110499145 LOC106589268 coding downstream 259419 19311370 ~ 19350990 (+)
LOC118942048 NA coding downstream 324288 19376239 ~ 19378591 (+)
G1670371 NA non-coding upstream 105056 18946267 ~ 18946564 (+)
G1670369 NA non-coding upstream 106737 18944647 ~ 18944883 (+)
G1670186 NA non-coding upstream 297867 18752738 ~ 18753753 (+)
G1670187 NA non-coding upstream 298994 18751460 ~ 18752626 (+)
G1670192 LOC105007702 non-coding upstream 325626 18703473 ~ 18725994 (+)
G1670375 NA non-coding downstream 654 19052605 ~ 19052677 (+)
G1670470 NA non-coding downstream 85402 19137353 ~ 19137566 (+)
G1670482 NA non-coding downstream 99594 19151545 ~ 19151833 (+)
G1670521 NA non-coding downstream 205966 19257917 ~ 19258152 (+)
G1670209 LOC105007702 other upstream 930453 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 1272246 17717036 ~ 17812707 (+)
G1670126 NA other upstream 1277918 17767481 ~ 17773702 (+)
G1670129 NA other upstream 1290808 17752294 ~ 17760812 (+)
G1670091 NA other upstream 1474358 17572831 ~ 17577262 (+)
G1671091 NA other downstream 1175844 20227795 ~ 20228168 (+)
G1672918 NA other downstream 2037452 21089403 ~ 21089830 (+)
G1672973 NA other downstream 2088574 21140525 ~ 21191078 (+)
G1673044 NA other downstream 2244421 21296372 ~ 21296854 (+)

Expression


Co-expression Network