G1670894


Basic Information

Item Value
gene id G1670894
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 19878400 ~ 19878689 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1911745
AAGGAAAatatcaactcaaattgctccttttgtaatgaccacccagaaacagtgttgcatcttttttggcattgtattcatgtaagaaaactgtggcaagacatcagtagatttctaatttaacacatttatgaagattttacactattgtggagagatgtactgcttggattctttacaaacgatagaaataagctgaaacatttttatgtaattaatttcattattcttttggccaaatttcatatacacaaatgtaaatttacaaacaacaaaacacattttcttac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1911745 True 290 lncRNA 0.29 1 19878400 19878689

Neighbor

gene id symbol gene type direction distance location
LOC110498765 LOC106589283 coding upstream 36311 19797750 ~ 19842089 (+)
LOC110498767 NA coding upstream 116838 19758888 ~ 19761562 (+)
LOC110499129 LOC106589284 coding upstream 147039 19728772 ~ 19731361 (+)
LOC110499130 LOC106589285 coding upstream 149776 19726589 ~ 19728624 (+)
LOC110499131 NA coding upstream 160364 19712507 ~ 19718036 (+)
LOC110499126 cbx1 coding downstream 284 19878973 ~ 19886391 (+)
LOC110498764 NA coding downstream 22474 19901163 ~ 19903369 (+)
LOC110498763 NA coding downstream 35775 19914464 ~ 19915261 (+)
LOC110499123 LOC106589291 coding downstream 37283 19915972 ~ 19938321 (+)
LOC110499120 LOC106589294 coding downstream 293725 20172414 ~ 20291141 (+)
G1670801 NA non-coding upstream 132746 19745433 ~ 19745654 (+)
G1670783 NA non-coding upstream 157328 19720785 ~ 19721072 (+)
G1670780 NA non-coding upstream 166087 19712097 ~ 19712313 (+)
G1670904 NA non-coding downstream 28117 19906806 ~ 19907730 (+)
G1671244 NA non-coding downstream 634331 20513020 ~ 20513264 (+)
G1671247 NA non-coding downstream 638625 20517314 ~ 20517532 (+)
G1671251 NA non-coding downstream 642892 20521581 ~ 20521797 (+)
G1671252 NA non-coding downstream 643126 20521815 ~ 20522112 (+)
LOC110499153 LOC106589263 other upstream 753164 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 1757233 18051611 ~ 18132470 (+)
G1670125 LOC105007702 other upstream 2099026 17717036 ~ 17812707 (+)
G1671091 NA other downstream 349106 20227795 ~ 20228168 (+)
G1672918 NA other downstream 1210714 21089403 ~ 21089830 (+)
G1672973 NA other downstream 1261836 21140525 ~ 21191078 (+)
G1673044 NA other downstream 1417683 21296372 ~ 21296854 (+)
G1673063 NA other downstream 1438109 21316798 ~ 21317412 (+)

Expression


Co-expression Network