G1672762


Basic Information

Item Value
gene id G1672762
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 20901332 ~ 20901794 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1913847
GCATTGTAAACTTGAAACCCACCTCAGTGCaagccaggcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcaaagagtAGAAGTGGGAATCCGCGTCTGCGTGGGTCTCGGGGGGGTGTTGTTGAAAGGTGTGGGAATCTGACTGGAGTTTAAATACAGCACAGCAAACCTCTCGACGGATGTACTGCACGGTGCTGTAGTCGTTGTGTCTCAACGTTTTCCTACTACTTCTTCCCATGGTCTTGCTCCTAGTCTCACCACAGCCCCCACCCATCATGTTGGGAGAGGCATGGCCATCATAATCATCTGGAAGTGAAATGAAGCAGATCCCTGCTGCAAAGTAAACTGTAAAGCTTTCTTTGGTTTCCCTAATCTATCTAGTCCAACAGTGACCCCTGTTTATTACCCATAGAGATTTTGCAATCAAAGAAAGAGAGATTATTGGATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1913847 True 463 lncRNA 0.47 1 20901332 20901794

Neighbor

gene id symbol gene type direction distance location
LOC110499111 LOC106589301 coding upstream 137250 20735432 ~ 20764082 (+)
LOC110499112 LOC106589300 coding upstream 165993 20706399 ~ 20735339 (+)
LOC110499114 LOC105007436 coding upstream 213269 20654464 ~ 20688063 (+)
LOC118942050 NA coding upstream 257264 20493325 ~ 20644068 (+)
LOC110499115 LOC106589298 coding upstream 532056 20319484 ~ 20369276 (+)
LOC110499108 LOC106578253 coding downstream 100857 21002651 ~ 21040111 (+)
LOC110499107 LOC106578254 coding downstream 252741 21154535 ~ 21168654 (+)
trnal-uag-53 NA coding downstream 326729 21228523 ~ 21228604 (+)
LOC110499104 LOC106589524 coding downstream 332417 21234211 ~ 21277617 (+)
LOC110499103 LOC106589525 coding downstream 430500 21332294 ~ 21377525 (+)
G1672761 NA non-coding upstream 92 20900773 ~ 20901240 (+)
G1671391 NA non-coding upstream 130888 20756491 ~ 20770444 (+)
G1671235 NA non-coding upstream 202167 20698167 ~ 20699165 (+)
G1671279 NA non-coding upstream 347794 20553314 ~ 20553538 (+)
G1672763 NA non-coding downstream 136 20901930 ~ 20902289 (+)
G1672765 NA non-coding downstream 13971 20915765 ~ 20916840 (+)
G1672766 NA non-coding downstream 26155 20927949 ~ 20928209 (+)
G1672768 NA non-coding downstream 49684 20951478 ~ 20951687 (+)
G1672769 NA non-coding downstream 66897 20968691 ~ 20969374 (+)
G1671091 NA other upstream 673164 20227795 ~ 20228168 (+)
LOC110499153 LOC106589263 other upstream 1776096 19094882 ~ 19201695 (+)
G1670209 LOC105007702 other upstream 2780165 18051611 ~ 18132470 (+)
G1670126 NA other upstream 3127630 17767481 ~ 17773702 (+)
G1670129 NA other upstream 3140520 17752294 ~ 17760812 (+)
G1672918 NA other downstream 187609 21089403 ~ 21089830 (+)
G1672973 NA other downstream 238731 21140525 ~ 21191078 (+)
G1673044 NA other downstream 394578 21296372 ~ 21296854 (+)
G1673063 NA other downstream 415004 21316798 ~ 21317412 (+)
G1673204 NA other downstream 484535 21386329 ~ 21389778 (+)

Expression


Co-expression Network