G1689092


Basic Information

Item Value
gene id G1689092
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35233201 ~ 35233536 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1931932
aaatacacctctgctgttttcaatcaagatctcagcgatcactgcctcattgcctgcatccgtaatgggtctgcgaccaaacgaccacccctcatcactgtcaaatgctccctgaaacacttctgcgagcaggcctttctaatcgacctggccggggtatcctggaatgacattgacctcatcccgtcagtagatgatgcctggctattctttaaaagtgccttcctcaccatcttaaataagcatgcccctctcaaaaaatgtagaactaggaatagatatagtccttggttcacgccagacctgtctgcccttgaccagcacaaaaacatccgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1931932 True 336 lncRNA 0.48 1 35233201 35233536

Neighbor

gene id symbol gene type direction distance location
LOC110499391 LOC106589815 coding upstream 53809 34766769 ~ 35179392 (+)
LOC110499597 NA coding upstream 547723 34684614 ~ 34685478 (+)
LOC110499390 LOC106589817 coding upstream 561771 34656043 ~ 34671430 (+)
LOC110499387 gsta3 coding upstream 602939 34627219 ~ 34630262 (+)
LOC110499384 LOC106589811 coding upstream 606623 34615700 ~ 34626578 (+)
LOC110499393 LOC106589819 coding downstream 79075 35312611 ~ 35323282 (+)
LOC110499394 LOC106589820 coding downstream 104913 35338449 ~ 35374027 (+)
LOC110499396 LOC106589821 coding downstream 148073 35381609 ~ 35384567 (+)
LOC110499398 m4a15 coding downstream 176703 35410239 ~ 35417932 (+)
LOC110499400 LOC100194728 coding downstream 205444 35438980 ~ 35446541 (+)
G1689018 NA non-coding upstream 42173 35186019 ~ 35191028 (+)
G1688729 NA non-coding upstream 56915 35175707 ~ 35176286 (+)
G1688728 NA non-coding upstream 59216 35173758 ~ 35173985 (+)
G1688674 NA non-coding upstream 153076 35079903 ~ 35080125 (+)
G1688533 NA non-coding upstream 351614 34879206 ~ 34881587 (+)
G1689100 NA non-coding downstream 4052 35237588 ~ 35237856 (+)
G1689110 NA non-coding downstream 12736 35246272 ~ 35246531 (+)
G1689115 NA non-coding downstream 15372 35248908 ~ 35249142 (+)
G1689124 NA non-coding downstream 21463 35254999 ~ 35255248 (+)
G1689132 NA non-coding downstream 27178 35260714 ~ 35260941 (+)
G1687675 NA other upstream 906947 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 2047925 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 2571553 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 5656643 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 5775280 29437357 ~ 29458499 (+)
G1689347 NA other downstream 447831 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 467684 35701200 ~ 35702156 (+)
G1689671 NA other downstream 648042 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 887080 36120616 ~ 36125390 (+)

Expression


Co-expression Network