G1690939


Basic Information

Item Value
gene id G1690939
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 37053777 ~ 37055465 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1934064
GTTTTTGGAAGTTACATTCAATAGCGGAACCAAAGGAGGAGTAAATTGACAGAACAGGTAATAACACTACACGGGTATAGAAATGTCCCAGGAATGGAGGAGTAAATTGACAGAACAGGTAATAACACGGGTATAGAAATGTCCCAGGAATGGTCGACAGTGCATTAAGTCCGCCGCCCATGAAATCAGAATATCGATCATCAAAAACTTAATTCCAAGGGTTGCAGATCACAAATAGATATATTTATAttcattgtatatatatatatatatatataaatgttttttcttttctttcagTAATACAATAAATGTTAACATTAGTTAATGGCTACAATGGACTTTCCCCCACCATGTCTGACAGCGTGTTATTAGTACAACGTTTAAATATAGAAGGATGTTACTAAAGTAGAGCTCGATATAAATAGAAGGTTTTAAAGAGAATTTAATAAATCTTTATCAGTTGGTCTGACGGAACTGTCaatcccttccttctctctgtctctcagaacGATCCGGAGCCCATATCTAAGACGGATGGAGGAGTcaacctgcatcccaaatggctccctattcactatatagtgctctgcttttgaccagtgccgtactgtatagggaatagggtgaatgTTGGGATACGCCGATGGGTTGTAGACAGCTCCCATGTTTCTAATTTATAGCTACATATCCAACCCGCCCACCTCCCTCACCCCGACACAATGTACAAAAGAGGCTGTTTGTTTACCACACATCACAGCCACCtcaaccacaacaccacaacaacatgttTTGATAGCAACGCTGGGGTTTTGGGGAGGGCTGTTGTGGCCGACTGTATCTACAAACTGTATGTAGGATCTTCCTTTGATTACCCTGTTGCAGGAAAACGTTCCTACAATGCAGGATATTTAAAACTTGTAGTATTTTTCAGGTATAAGAATGCTTcagaagtttgtcatttccactttgaaatttcagacttgatttttccCTTACGGACATTTTTTCAGACGCTACAAAAAtctccattcattataatccacatcatAATCCACAATATAATCcacattataatccacattataatccacattataattcaaatttcctgttgctgtatgattattttcctactgtaggagactggctcaaattaagatcctacatctgtaaataCAATAGAGTGGGTGTTCCCTGACTTTTTACATGATTCTCTGCTTCCTCTCTGCTAAACACTTCATTGGCTTTGATGTTGGAGCATTCAGGGGGTCTTTTAGTTCAAGCTACAGAGATACAAAGTGGACTGGAAGCGCAACCTGCAGAGGAGCTGTTTTTTAAGTGGAAGGAAGCTCTACACCAGAGTTTAACTGTCCCCCTTTATATGACATCACTTGTTGTTTTCACATGACCCACAGGAAGTAATTCATTCTAAATTGTCAAAGATTGTTGACTGCCGAGCGAGGTTGACCTGTAAACGTGGCCCAAATGGGTCAGAGTTTGTATGTAAATGTCACACGTTTTCACCTTTCAAACAATGAACCGAGGACATTTGTGGAAGATGCAGCCTAGCTCTCATTTGCCTGTCATTTGGTGCCATTTGTTGGCTTTGCTATGGTGTTACCGCAGTGTTACTGTGGCATTACCATGACGACCAAATAAGAGTTATGTCAGGAGGACAAGCCACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1934064 True 1689 lncRNA 0.40 1 37053777 37055465

Neighbor

gene id symbol gene type direction distance location
LOC110499442 LOC106589867 coding upstream 68217 36965177 ~ 36985560 (+)
LOC118942467 NA coding upstream 135126 36918536 ~ 36918651 (+)
LOC110499440 NA coding upstream 137590 36914324 ~ 36916187 (+)
LOC118942068 NA coding upstream 144207 36906650 ~ 36909570 (+)
LOC118942468 NA coding upstream 149832 36903830 ~ 36903945 (+)
LOC110499446 LOC106589902 coding downstream 1020508 38075973 ~ 38081270 (+)
LOC110499447 LOC106589900 coding downstream 1028430 38083895 ~ 38203970 (+)
LOC110499600 NA coding downstream 1525270 38580735 ~ 38594305 (+)
LOC110499544 mkk6c coding downstream 1539354 38594819 ~ 38638772 (+)
LOC118942016 NA coding downstream 1584130 38639595 ~ 38640649 (+)
G1690938 NA non-coding upstream 3249 37050299 ~ 37050528 (+)
G1690931 NA non-coding upstream 11200 37042236 ~ 37042577 (+)
G1690805 NA non-coding upstream 66546 36987075 ~ 36987231 (+)
G1690804 NA non-coding upstream 67003 36986267 ~ 36986774 (+)
G1690810 NA non-coding upstream 79866 36973693 ~ 36973911 (+)
G1690950 NA non-coding downstream 14230 37069695 ~ 37070886 (+)
G1690961 NA non-coding downstream 41828 37097293 ~ 37099333 (+)
G1691006 NA non-coding downstream 158351 37213816 ~ 37214047 (+)
G1691016 NA non-coding downstream 183627 37239092 ~ 37239406 (+)
G1691027 NA non-coding downstream 224333 37279798 ~ 37280001 (+)
G1690753 NA other upstream 173039 36878051 ~ 36880738 (+)
G1690116 NA other upstream 741079 36304939 ~ 36312698 (+)
G1690099 NA other upstream 777834 36275482 ~ 36275943 (+)
G1690092 NA other upstream 788796 36264660 ~ 36264981 (+)
G1689732 LOC106612293 other upstream 928387 36120616 ~ 36125390 (+)
G1691142 NA other downstream 486455 37541920 ~ 37543265 (+)
G1691189 NA other downstream 595161 37650626 ~ 37654064 (+)
G1691267 NA other downstream 749078 37804543 ~ 37809061 (+)
G1691990 aatk other downstream 1167040 38222505 ~ 38222735 (+)
G1691992 NA other downstream 1172550 38228015 ~ 38228551 (+)

Expression


Co-expression Network