G1692462


Basic Information

Item Value
gene id G1692462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38654072 ~ 38654310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935745
cattcttaaaataaagtgatgatcctaactgacctcagacagggattttatttttaaatgtctggactggtgaaactgagtttaaatgtatttgactaaggtgtatgtaaacttctgactaccATGGATAAACTCTTTTGAAGATGTAATcctgagacaggtgttttatgtaACAGCCTTCTGTGTATTTCTCTTTTTGACTCCCTCCACATTTTGTAATCAAatgccagaattttctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935745 True 239 lncRNA 0.34 1 38654072 38654310

Neighbor

gene id symbol gene type direction distance location
LOC118942016 NA coding upstream 13423 38639595 ~ 38640649 (+)
LOC110499544 mkk6c coding upstream 15300 38594819 ~ 38638772 (+)
LOC110499600 NA coding upstream 59767 38580735 ~ 38594305 (+)
LOC110499447 LOC106589900 coding upstream 450102 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 572802 38075973 ~ 38081270 (+)
LOC110499463 LOC106589886 coding downstream 402726 39057036 ~ 39068138 (+)
plaub plau coding downstream 456580 39110890 ~ 39118850 (+)
LOC110499465 LOC106589883 coding downstream 469768 39124078 ~ 39196200 (+)
LOC118942069 NA coding downstream 489646 39143956 ~ 39150402 (+)
LOC118942017 NA coding downstream 762559 39416869 ~ 39418951 (+)
G1692460 NA non-coding upstream 1426 38652407 ~ 38652646 (+)
G1692459 NA non-coding upstream 2771 38651090 ~ 38651301 (+)
G1692456 NA non-coding upstream 6963 38646897 ~ 38647109 (+)
G1692428 NA non-coding upstream 8452 38643523 ~ 38645620 (+)
G1692463 NA non-coding downstream 249 38654559 ~ 38654768 (+)
G1692471 NA non-coding downstream 8789 38663099 ~ 38671784 (+)
G1692473 NA non-coding downstream 15831 38670141 ~ 38674903 (+)
G1692477 NA non-coding downstream 24430 38678740 ~ 38679052 (+)
G1692480 NA non-coding downstream 26780 38681090 ~ 38681414 (+)
G1692406 NA other upstream 84626 38568269 ~ 38569446 (+)
G1691992 NA other upstream 425521 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 431337 38222505 ~ 38222735 (+)
G1691267 NA other upstream 845011 37804543 ~ 37809061 (+)
G1691189 NA other upstream 1000008 37650626 ~ 37654064 (+)
G1692568 NA other downstream 56641 38710951 ~ 38712291 (+)
G1692702 NA other downstream 185624 38839934 ~ 38840271 (+)
G1693184 NA other downstream 702035 39356345 ~ 39359635 (+)
G1693699 NA other downstream 1227039 39881349 ~ 39881843 (+)
G1693700 NA other downstream 1227648 39881958 ~ 39882625 (+)

Expression


Co-expression Network