G1692471


Basic Information

Item Value
gene id G1692471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38663099 ~ 38671784 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935759
cctccaatatattatacaactgtcccccatcctccaatatattatacaactgtcccccattctcaatatattatacaactgtctccccattctcaatatattatacaactgtctccccatcctccaatatattatacaactgtccccatcctccaatatattatacaactgtcccccatcctccaatatattatacaactgtccccccatcctccaatatattatacaactgtctccccatcctccaatatattatacaactgtcccccatcctccaatatattatacaactgtccccccatcctccaatatattatacaactgtctccccatcctccaatatattatacaactgtcccacattctcaatatattatacaactgtctccccatcctccaatatattatacaactgtcccccattctcaatatattatacaactgtctccccatcctcaatatattatacaactgtctccccatcctccaatatataatacaactgtctccccatcctccaatatataatacaactgtctccccatcctccaatatattatacaac
>TU1935758
tattatacaactgtctccccatcctccaatatattatacaactgtctcccatcctccaatatattatacaactgtcccccattctcaatatattatacaactgtcccccatcctccaatatattatacaactgtctccccattctcaatatattatacaactgtcccccatcctccaatatattatacaactgtctcccatcctccaatatattatacaactgtcccccattctcaatatattatacaactgtcccccatcctccaatatattatacaactgtctcccatcctccaatatattatacaactgtctccccattctcaatatattatacaactgtctccccatcctccaatatattatacaactgtcccccattctcaatatattatacaactgtctccccattctcaatatattatacaactgtctcccatcctccaatatattatacaactgtcccccattctcaatatattatacaactgtcccccatcctccaatatattatacaactgtctccccatcctccaatatattatacaactgtctccccatcctccaatatattatacaactgtctccccatcctccaatatattatacaactgtccccccatcctccaatatattatacaactgtcccccctcctccaatatattatacaactgtcccatcaccttccaatatattatacaactgtcccatcaccttccaatatattatacaactgtctccccatcctccaatatattatacaactgtctccccatcctccaatatattatacaactgtctccccatcctccaatatattatacaactgtcccccatcctccaatatattatacaactgtctccccatcctccaatatattatacaactgtcccccc

Function

NR:

description
PREDICTED: uncharacterized protein LOC107395943

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935759 False 565 lncRNA 0.38 4 38663099 38671784
TU1935758 True 898 lncRNA 0.38 3 38663746 38668771

Neighbor

gene id symbol gene type direction distance location
LOC118942016 NA coding upstream 22450 38639595 ~ 38640649 (+)
LOC110499544 mkk6c coding upstream 24327 38594819 ~ 38638772 (+)
LOC110499600 NA coding upstream 68794 38580735 ~ 38594305 (+)
LOC110499447 LOC106589900 coding upstream 459129 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 581829 38075973 ~ 38081270 (+)
LOC110499463 LOC106589886 coding downstream 385252 39057036 ~ 39068138 (+)
plaub plau coding downstream 439106 39110890 ~ 39118850 (+)
LOC110499465 LOC106589883 coding downstream 452294 39124078 ~ 39196200 (+)
LOC118942069 NA coding downstream 472172 39143956 ~ 39150402 (+)
LOC118942017 NA coding downstream 745085 39416869 ~ 39418951 (+)
G1692463 NA non-coding upstream 8331 38654559 ~ 38654768 (+)
G1692462 NA non-coding upstream 8789 38654072 ~ 38654310 (+)
G1692460 NA non-coding upstream 10453 38652407 ~ 38652646 (+)
G1692459 NA non-coding upstream 11798 38651090 ~ 38651301 (+)
G1692456 NA non-coding upstream 15990 38646897 ~ 38647109 (+)
G1692477 NA non-coding downstream 6956 38678740 ~ 38679052 (+)
G1692480 NA non-coding downstream 9306 38681090 ~ 38681414 (+)
G1692483 NA non-coding downstream 16319 38688103 ~ 38688329 (+)
G1692486 NA non-coding downstream 23116 38694900 ~ 38695154 (+)
G1692564 NA non-coding downstream 36136 38707920 ~ 38708125 (+)
G1692406 NA other upstream 93653 38568269 ~ 38569446 (+)
G1691992 NA other upstream 434548 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 440364 38222505 ~ 38222735 (+)
G1691267 NA other upstream 854038 37804543 ~ 37809061 (+)
G1691189 NA other upstream 1009035 37650626 ~ 37654064 (+)
G1692568 NA other downstream 39167 38710951 ~ 38712291 (+)
G1692702 NA other downstream 168150 38839934 ~ 38840271 (+)
G1693184 NA other downstream 684561 39356345 ~ 39359635 (+)
G1693699 NA other downstream 1209565 39881349 ~ 39881843 (+)
G1693700 NA other downstream 1210174 39881958 ~ 39882625 (+)

Expression


Co-expression Network