G1692473


Basic Information

Item Value
gene id G1692473
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38670141 ~ 38674903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935768
cccatcctccaatatattatacaactgtccccattctcaatatattatacaactgtctccccatcctccaatatattatacaactgtccccccatcctccaatatattatacaactgtcccccattctcaatatattatacaactgtctccccattctcaatatattatacaactgtctccccatcctccaatatattatacaactgtcccccatcctccaatatattatacaactgtcccccattctcaatatattatacaactgtcccccattctcaatatattatacaactgtctccccat
>TU1935769
ccccatcctccaatatattatacaactgtcccccatcctccaatatattatacaactgtctccccatcctccaatatattatacaactgtctccccatcctccaatatattatacaactgtccccccatcctccaatatattatacaactgtctccccattctcaatatattatacaactgtcccccattctcaatatattatacaactgtctccccat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935768 False 304 lncRNA 0.37 3 38670141 38674903
TU1935769 True 219 lncRNA 0.39 2 38674290 38674903

Neighbor

gene id symbol gene type direction distance location
LOC118942016 NA coding upstream 29492 38639595 ~ 38640649 (+)
LOC110499544 mkk6c coding upstream 31369 38594819 ~ 38638772 (+)
LOC110499600 NA coding upstream 75836 38580735 ~ 38594305 (+)
LOC110499447 LOC106589900 coding upstream 466171 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 588871 38075973 ~ 38081270 (+)
LOC110499463 LOC106589886 coding downstream 382133 39057036 ~ 39068138 (+)
plaub plau coding downstream 435987 39110890 ~ 39118850 (+)
LOC110499465 LOC106589883 coding downstream 449175 39124078 ~ 39196200 (+)
LOC118942069 NA coding downstream 469053 39143956 ~ 39150402 (+)
LOC118942017 NA coding downstream 741966 39416869 ~ 39418951 (+)
G1692463 NA non-coding upstream 15373 38654559 ~ 38654768 (+)
G1692462 NA non-coding upstream 15831 38654072 ~ 38654310 (+)
G1692460 NA non-coding upstream 17495 38652407 ~ 38652646 (+)
G1692459 NA non-coding upstream 18840 38651090 ~ 38651301 (+)
G1692456 NA non-coding upstream 23032 38646897 ~ 38647109 (+)
G1692477 NA non-coding downstream 3837 38678740 ~ 38679052 (+)
G1692480 NA non-coding downstream 6187 38681090 ~ 38681414 (+)
G1692483 NA non-coding downstream 13200 38688103 ~ 38688329 (+)
G1692486 NA non-coding downstream 19997 38694900 ~ 38695154 (+)
G1692564 NA non-coding downstream 33017 38707920 ~ 38708125 (+)
G1692406 NA other upstream 100695 38568269 ~ 38569446 (+)
G1691992 NA other upstream 441590 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 447406 38222505 ~ 38222735 (+)
G1691267 NA other upstream 861080 37804543 ~ 37809061 (+)
G1691189 NA other upstream 1016077 37650626 ~ 37654064 (+)
G1692568 NA other downstream 36048 38710951 ~ 38712291 (+)
G1692702 NA other downstream 165031 38839934 ~ 38840271 (+)
G1693184 NA other downstream 681442 39356345 ~ 39359635 (+)
G1693699 NA other downstream 1206446 39881349 ~ 39881843 (+)
G1693700 NA other downstream 1207055 39881958 ~ 39882625 (+)

Expression


Co-expression Network