G1692851 (LOC106589887)


Basic Information

Item Value
gene id G1692851
gene name LOC106589887
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 39019155 ~ 39026506 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1936210
cacacacacacacacacacacacctgtctttgcCTCACCTAGTGCCACCAGAGGTGTGATAATGGGTATAGCCAGGGGTGCGATGAACAGGTAGACACTCCGGGGTAGACAGGGTATCTTCCAGGTGCTGGAGTCACCCAGGCCGATCACGTTGGTGTGGGCATGATGCATCTTAATGTGGCCTGTTACACCTGCCCTTGCTGTGAACGACCCACACACacCTCTATGAAGAACACAGCCCAGAACTCGGCCCAGGCGGGGGACTCGCTCAGCGATCCGTGGCTGGCCAGGTGGGTTCCCTTAATGGAAATGACAGCATGGGACACCCCCATCAGCACCATGCCCAGGACAAACACCAGGATCTGGGATGAGCCCAGCAGCAGAAAGGCCAGGACCAGGATAGTGATGTCGATGCCTCGCCTCTCCCACCAGCTACTCTCCTTCACTGTCTTCTGAACCAAACGGGTCAGCTCCATCATCAGGGACTCTTTGTCTGTTCCCTTTCCCCCTTCGTTCATCATCTCTacattctccttcctcctctccttaacGCCGGTCTCTccattctctttccctctgtccatATCCTGTTTGGAGTTAACAGTGTTTATTTGGAATAAGgcctctctaccctcccagggTTTAgcatccacctctcctcctcctccagccctctgttcttccctccattcctccggTACATTCTGCATTTCAGCTCCCTTTGTGCCTCCCTCCTGACCAACAACAAAGTACGGTACAAGCGACAGTGCTCGGTGTATGCAGCGGCTGTATGGACGGACTCATAGGCAGCGGCCAGACTCTGAGGATAGTAGCCTGGACATTGTGTCCTGAACACAAAGGGTCCGGACTGAAGTAAACATGACAGGAAGTGTCTTCTGAGAAGTTCAGCTCCTTTACAACCACTCCGACGGTCCTCACCTTCCTTTTCTCCTTCTGATACAATCTGTGGTTtgtactcccctcctccccttctcttccccttctcctcctctcctcctccacttctcttctcttcctctcctcttccccacttcgcctcttctcctcctcttcttctcgactcttctcctcttctccaacACGCTGTGtacttctctctttccctgtcctcctcctcttcttctctgttctctctctcccccctttctctcctctcctcctcctcctcttctctgtgttctccctctctcctttctcctctgtgttctctctctcctttctctcctctcctcctcctcttctcctttgtgttctttctctctctcctttctctcctctcctcctctgtgttctctctcctttctgtcttctcctctctccttgtcaGGTTGTTCCTGTAGTGCAGTCCTTGTTTAATACAGCAGCAGCTCTGGGGACGTCCTGTGGCTTCGATGGGTGTGAGCTAAGTGAGCCGGGGCAAGTCCCAgtgtcacacaccacacacaaagcCATGAATACTGCACGGACACACACGACTCTACACCCTGCAGCTGCTCACCTCCAGAAATGATTCTGCTGCTTATTCCCC

Function

NR:

description
fatty acid desaturase 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1936210 True 1549 lncRNA 0.53 3 39019155 39026506

Neighbor

gene id symbol gene type direction distance location
LOC118942016 NA coding upstream 378506 38639595 ~ 38640649 (+)
LOC110499544 mkk6c coding upstream 380383 38594819 ~ 38638772 (+)
LOC110499600 NA coding upstream 424850 38580735 ~ 38594305 (+)
LOC110499447 LOC106589900 coding upstream 815185 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 937885 38075973 ~ 38081270 (+)
LOC110499463 LOC106589886 coding downstream 30530 39057036 ~ 39068138 (+)
plaub plau coding downstream 84384 39110890 ~ 39118850 (+)
LOC110499465 LOC106589883 coding downstream 97572 39124078 ~ 39196200 (+)
LOC118942069 NA coding downstream 117450 39143956 ~ 39150402 (+)
LOC118942017 NA coding downstream 390363 39416869 ~ 39418951 (+)
G1692850 NA non-coding upstream 2427 39016074 ~ 39016728 (+)
G1692818 NA non-coding upstream 12098 39005266 ~ 39007057 (+)
G1692824 NA non-coding upstream 36808 38981267 ~ 38982347 (+)
G1692838 NA non-coding upstream 41571 38976893 ~ 38977584 (+)
G1692835 NA non-coding upstream 50591 38967298 ~ 38968564 (+)
G1692829 NA non-coding downstream 500 39027006 ~ 39069120 (+)
G1692860 NA non-coding downstream 12112 39038618 ~ 39040041 (+)
G1692870 NA non-coding downstream 32988 39059494 ~ 39060106 (+)
G1692906 NA non-coding downstream 112496 39139002 ~ 39139289 (+)
G1692913 NA non-coding downstream 132241 39158747 ~ 39159276 (+)
G1692702 NA other upstream 178884 38839934 ~ 38840271 (+)
G1692568 NA other upstream 306864 38710951 ~ 38712291 (+)
G1692406 NA other upstream 449709 38568269 ~ 38569446 (+)
G1691992 NA other upstream 790604 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 796420 38222505 ~ 38222735 (+)
G1693184 NA other downstream 329839 39356345 ~ 39359635 (+)
G1693699 NA other downstream 854843 39881349 ~ 39881843 (+)
G1693700 NA other downstream 855452 39881958 ~ 39882625 (+)
G1693914 NA other downstream 1185016 40211522 ~ 40212953 (+)
G1695272 NA other downstream 2591521 41618027 ~ 41618505 (+)

Expression


Co-expression Network