G1692829


Basic Information

Item Value
gene id G1692829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 39027006 ~ 39069120 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1936185
ATACGACCCAGGGGACATCAGAGCACTAGGCTAATCAGACCTTTCCCTCTACAGCAACTCTGTCTGGTTCTAATCAGAACAGGAGCTGTCAGTCATGTTATCACACTGTAACCGTGGTGACAGAAACAGTAGGAAGACCTACCCAATCATCTTTGTAATTACAGTTGTAATGACCAGGATATTAACAATCAGCGTCAAAAAAGTGACTTTGTTAATTGTAATAAACATTTTTAATAACTGTTGTGGGTGAAAGTACATCCAAACATGACTTATGTTGTATTCCAAAGATTGTATCCACACATCTTCGACttgcagtagtgagtgcatacataaTCATTGAAGTTACATACAAAACACATTCAAACCAAATTGTATTTGGCacaagcgccgaatacaacagcATTTGCCTGCAGTTCAAAAGCCAATACATACATTCCAGAGATATCACTTGTTGTCTCAGTCAGTCGGTTCACAGAGGTCCCGGTCAGTCCCCAGGTCTCAGTCAGTTGGTTCACAGAGGTCCCGGTCAGTCCCCaggtctctctctagtctgtctcaGTCAGTCGGTTCACAGAGGTCCCGGTCAGTCCCCAGGTCTCTCTCTAGTCTTTCTCAGTCAGTCGGTTCACAGAGGTCCCGGTCAGTCCCCAGgtctcagtcagtcagttcacAGAGGTCCCGGTCAGTCCCCAGGTCTCAGTCAGTCGGTTCACAGAGGTCCCGGTCAGTCCCCaggtctctctctagtctgtctcagtcagtcagctcaCAGAGGTCCCGGTCAGTCTCCAGGTCTCAGTCAGTCCCCAGGTCACAGAGGTCCCGGTCAGTCCCCAGGTCACAGAGGTCCCGGTCAGTCCCCAGGTCACAGAGGTCCCAGTCAGTCCCCAGGTCACAGAGGTCCCAGTCAGTCCCCAGGTCACAGAGGTCCCAGTCAGTCCCCAGGTCACAGAGGTCCCAGTCAGTCCCCaggtctctctctagtctgtctcaGTCAGTCTCTATTTCACACTCTTCCAAAATGAAAAGGAGCTTTACTGTGATAAAAGGGATACCAAAAAATGTAACTTTCCATAAAAGCATTTCAAGAATAGAAACTGAAAATAATAAGTACAATAAATCTTCATCTAAAACAATCTTAGTAACATATACACTATTGtataaaagtttggggtcacttagaaatgtccttgtttttgaaagaa

Function

NR:

description
PREDICTED: DCN1-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1936185 True 1205 lncRNA 0.46 4 39027006 39069120

Neighbor

gene id symbol gene type direction distance location
LOC118942016 NA coding upstream 386357 38639595 ~ 38640649 (+)
LOC110499544 mkk6c coding upstream 388234 38594819 ~ 38638772 (+)
LOC110499600 NA coding upstream 432701 38580735 ~ 38594305 (+)
LOC110499447 LOC106589900 coding upstream 823036 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 945736 38075973 ~ 38081270 (+)
plaub plau coding downstream 41770 39110890 ~ 39118850 (+)
LOC110499465 LOC106589883 coding downstream 54958 39124078 ~ 39196200 (+)
LOC118942069 NA coding downstream 74836 39143956 ~ 39150402 (+)
LOC118942017 NA coding downstream 347749 39416869 ~ 39418951 (+)
LOC110499546 LOC106589879 coding downstream 447419 39516539 ~ 39618380 (+)
G1692851 LOC106589887 non-coding upstream 500 39019155 ~ 39026506 (+)
G1692850 NA non-coding upstream 10278 39016074 ~ 39016728 (+)
G1692818 NA non-coding upstream 19949 39005266 ~ 39007057 (+)
G1692824 NA non-coding upstream 44659 38981267 ~ 38982347 (+)
G1692838 NA non-coding upstream 49422 38976893 ~ 38977584 (+)
G1692906 NA non-coding downstream 69882 39139002 ~ 39139289 (+)
G1692913 NA non-coding downstream 89627 39158747 ~ 39159276 (+)
G1692916 NA non-coding downstream 103410 39172530 ~ 39175253 (+)
G1693053 NA non-coding downstream 152424 39221544 ~ 39221809 (+)
G1693062 NA non-coding downstream 166322 39235442 ~ 39235657 (+)
G1692702 NA other upstream 186735 38839934 ~ 38840271 (+)
G1692568 NA other upstream 314715 38710951 ~ 38712291 (+)
G1692406 NA other upstream 457560 38568269 ~ 38569446 (+)
G1691992 NA other upstream 798455 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 804271 38222505 ~ 38222735 (+)
G1693184 NA other downstream 287225 39356345 ~ 39359635 (+)
G1693699 NA other downstream 812229 39881349 ~ 39881843 (+)
G1693700 NA other downstream 812838 39881958 ~ 39882625 (+)
G1693914 NA other downstream 1142402 40211522 ~ 40212953 (+)
G1695272 NA other downstream 2548907 41618027 ~ 41618505 (+)

Expression


Co-expression Network