Gene
RNA
| Item | Value |
|---|---|
| gene id | G1692913 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 39158747 ~ 39159276 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1936280 | False | 318 | lncRNA | 0.34 | 2 | 39158747 | 39159276 |
| TU1936281 | True | 371 | lncRNA | 0.35 | 2 | 39158747 | 39159276 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942069 | NA | coding | upstream | 8345 | 39143956 ~ 39150402 (+) |
| plaub | plau | coding | upstream | 39897 | 39110890 ~ 39118850 (+) |
| LOC110499463 | LOC106589886 | coding | upstream | 90609 | 39057036 ~ 39068138 (+) |
| LOC118942016 | NA | coding | upstream | 518098 | 38639595 ~ 38640649 (+) |
| LOC110499544 | mkk6c | coding | upstream | 519975 | 38594819 ~ 38638772 (+) |
| LOC118942017 | NA | coding | downstream | 257593 | 39416869 ~ 39418951 (+) |
| LOC110499546 | LOC106589879 | coding | downstream | 357263 | 39516539 ~ 39618380 (+) |
| LOC110499467 | LOC106589877 | coding | downstream | 511774 | 39671050 ~ 39678438 (+) |
| LOC110499468 | vdac2 | coding | downstream | 524319 | 39683595 ~ 39687922 (+) |
| mgme1 | mgme1 | coding | downstream | 1280645 | 40439921 ~ 40443984 (+) |
| G1692906 | NA | non-coding | upstream | 19458 | 39139002 ~ 39139289 (+) |
| G1692829 | NA | non-coding | upstream | 89627 | 39027006 ~ 39069120 (+) |
| G1692870 | NA | non-coding | upstream | 98641 | 39059494 ~ 39060106 (+) |
| G1692860 | NA | non-coding | upstream | 118706 | 39038618 ~ 39040041 (+) |
| G1692851 | LOC106589887 | non-coding | upstream | 132241 | 39019155 ~ 39026506 (+) |
| G1692916 | NA | non-coding | downstream | 13254 | 39172530 ~ 39175253 (+) |
| G1693053 | NA | non-coding | downstream | 62268 | 39221544 ~ 39221809 (+) |
| G1693062 | NA | non-coding | downstream | 76166 | 39235442 ~ 39235657 (+) |
| G1693076 | NA | non-coding | downstream | 91500 | 39250776 ~ 39250975 (+) |
| G1693078 | NA | non-coding | downstream | 94195 | 39253471 ~ 39254132 (+) |
| G1692702 | NA | other | upstream | 318476 | 38839934 ~ 38840271 (+) |
| G1692568 | NA | other | upstream | 446456 | 38710951 ~ 38712291 (+) |
| G1692406 | NA | other | upstream | 589301 | 38568269 ~ 38569446 (+) |
| G1691992 | NA | other | upstream | 930196 | 38228015 ~ 38228551 (+) |
| G1691990 | aatk | other | upstream | 936012 | 38222505 ~ 38222735 (+) |
| G1693184 | NA | other | downstream | 197069 | 39356345 ~ 39359635 (+) |
| G1693699 | NA | other | downstream | 722073 | 39881349 ~ 39881843 (+) |
| G1693700 | NA | other | downstream | 722682 | 39881958 ~ 39882625 (+) |
| G1693914 | NA | other | downstream | 1052246 | 40211522 ~ 40212953 (+) |
| G1695272 | NA | other | downstream | 2458751 | 41618027 ~ 41618505 (+) |
