G1693213


Basic Information

Item Value
gene id G1693213
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 39400167 ~ 39403156 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1936629
CTTCACTCCTTTCTACTCTGTGTTGTCTTCTCTCATCTCTACTCTGcgttgtcttctctcctctccactctgcgttgtcttctctcctctactctggtTTGTCttatctcctctctactctgtgttatttctctcctctctactctgtgttgtcttctctcctctactctgtgttgtcttctctcctctctactctgtgttgtcttctctcctctctactctgtgttgtcttatctcctctctactctgtgttgtcttctctcctctctactctgtgttgtcttctctcctctactctgtgttgtttctctcctctactctgtgttgtcttctctcctctactctgtgttgtcttctctcctctctactctgtgttgtcttctctcctctctactctgtgttgtcttctctcctctctacgctgtgttgtcttctctcctttctactctgtgttgtcttctctcctctctactctgtgttgtcttatctcctctactctgtgttgtcttctctactctctactctgtgttgtcttctctcctctctactctgtgttgtcttctctcctctctactctgtgttgtcttctctcctctctactctgtgttgtcttctctcctctctactctgtgttgtcttatctcctctactctgtgttgtcttctctcctctctactctgttgtcttctctattcTGTTGTTTTTTCACCTCTCTGTGTTgtgttctctcctctactctgtgttgtcttctctcctctactctgtgttgtcttctcttctctcctctctactctgtgttgtcttctcttctctcctctgcgttgtcttctctcctctcaaatTATGACATCACCACTAGTAGCTAATTTAGTTCCTTTATTAATTCATCTTATGAATCGTTATTTTCTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1936629 True 911 lncRNA 0.44 3 39400167 39403156

Neighbor

gene id symbol gene type direction distance location
LOC110499465 LOC106589883 coding upstream 203967 39124078 ~ 39196200 (+)
LOC118942069 NA coding upstream 249765 39143956 ~ 39150402 (+)
plaub plau coding upstream 281317 39110890 ~ 39118850 (+)
LOC110499463 LOC106589886 coding upstream 332029 39057036 ~ 39068138 (+)
LOC118942016 NA coding upstream 759518 38639595 ~ 38640649 (+)
LOC118942017 NA coding downstream 13713 39416869 ~ 39418951 (+)
LOC110499546 LOC106589879 coding downstream 113383 39516539 ~ 39618380 (+)
LOC110499467 LOC106589877 coding downstream 267894 39671050 ~ 39678438 (+)
LOC110499468 vdac2 coding downstream 280439 39683595 ~ 39687922 (+)
mgme1 mgme1 coding downstream 1036765 40439921 ~ 40443984 (+)
G1693208 NA non-coding upstream 5273 39394675 ~ 39394894 (+)
G1693206 NA non-coding upstream 10089 39389845 ~ 39390078 (+)
G1693205 NA non-coding upstream 11091 39388844 ~ 39389076 (+)
G1693195 NA non-coding upstream 27791 39371984 ~ 39372376 (+)
G1693184 NA non-coding upstream 40532 39356345 ~ 39359635 (+)
G1693215 NA non-coding downstream 8358 39411514 ~ 39411768 (+)
G1693289 NA non-coding downstream 173170 39576326 ~ 39579030 (+)
G1693312 NA non-coding downstream 234725 39637881 ~ 39641609 (+)
G1693313 NA non-coding downstream 234919 39638075 ~ 39656568 (+)
G1693316 NA non-coding downstream 253680 39656836 ~ 39658192 (+)
G1692702 NA other upstream 559896 38839934 ~ 38840271 (+)
G1692568 NA other upstream 687876 38710951 ~ 38712291 (+)
G1692406 NA other upstream 830721 38568269 ~ 38569446 (+)
G1691992 NA other upstream 1171616 38228015 ~ 38228551 (+)
G1693699 NA other downstream 478193 39881349 ~ 39881843 (+)
G1693700 NA other downstream 478802 39881958 ~ 39882625 (+)
G1693914 NA other downstream 808366 40211522 ~ 40212953 (+)
G1695272 NA other downstream 2214871 41618027 ~ 41618505 (+)
LOC110499605 LOC106590859 other downstream 3106475 42484544 ~ 42511247 (+)

Expression


Co-expression Network