G1693313


Basic Information

Item Value
gene id G1693313
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 39638075 ~ 39656568 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1936743
ataccaacacatacagcacatactagcacatacagcacataccagcacatacagcacataccaacacatacagtacataccaacacatacagcatataccaacacatacagcacataccaacacatacaacacatacaacacataccaacatataccaacacatacagcacatattaacacatacagcacataccaacacatacagcacataccaacacatacagcacatacaacacataccaaca
>TU1936742
accagcacatacagcacataccaacacatacagcacataccaacacatacagcacataccaacacatacagcacatacaacacataccaacatataccaacacatacagcacataccagcacataccaacacatacagcacataccaacacatacagtacataccaacacatacagcatatACCAACACATTActcacataccaacacatacagtacatattaacacatacagcacataccaacacatacagcacataccaacacatacagcacatacaacacataccaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1936743 False 246 lncRNA 0.39 2 39638075 39656568
TU1936742 True 292 lncRNA 0.40 3 39650786 39656568

Neighbor

gene id symbol gene type direction distance location
LOC110499546 LOC106589879 coding upstream 19695 39516539 ~ 39618380 (+)
LOC118942017 NA coding upstream 219124 39416869 ~ 39418951 (+)
LOC110499465 LOC106589883 coding upstream 441875 39124078 ~ 39196200 (+)
LOC118942069 NA coding upstream 487673 39143956 ~ 39150402 (+)
plaub plau coding upstream 519225 39110890 ~ 39118850 (+)
LOC110499467 LOC106589877 coding downstream 14482 39671050 ~ 39678438 (+)
LOC110499468 vdac2 coding downstream 27027 39683595 ~ 39687922 (+)
mgme1 mgme1 coding downstream 783353 40439921 ~ 40443984 (+)
ephx5 LOC105009996 coding downstream 798226 40454794 ~ 40467136 (+)
LOC110499485 NA coding downstream 831388 40487956 ~ 40490785 (+)
G1693289 NA non-coding upstream 59045 39576326 ~ 39579030 (+)
G1693215 NA non-coding upstream 226307 39411514 ~ 39411768 (+)
G1693213 NA non-coding upstream 234919 39400167 ~ 39403156 (+)
G1693208 NA non-coding upstream 243181 39394675 ~ 39394894 (+)
G1693206 NA non-coding upstream 247997 39389845 ~ 39390078 (+)
G1693316 NA non-coding downstream 268 39656836 ~ 39658192 (+)
G1693321 LOC106589878 non-coding downstream 8684 39665252 ~ 39668313 (+)
G1693340 NA non-coding downstream 72078 39728646 ~ 39746677 (+)
G1693575 NA non-coding downstream 115422 39771990 ~ 39772253 (+)
G1693582 NA non-coding downstream 121206 39777774 ~ 39778014 (+)
G1693184 NA other upstream 278440 39356345 ~ 39359635 (+)
G1692702 NA other upstream 797804 38839934 ~ 38840271 (+)
G1692568 NA other upstream 925784 38710951 ~ 38712291 (+)
G1692406 NA other upstream 1068629 38568269 ~ 38569446 (+)
G1691992 NA other upstream 1409524 38228015 ~ 38228551 (+)
G1693699 NA other downstream 224781 39881349 ~ 39881843 (+)
G1693700 NA other downstream 225390 39881958 ~ 39882625 (+)
G1693914 NA other downstream 554954 40211522 ~ 40212953 (+)
G1695272 NA other downstream 1961459 41618027 ~ 41618505 (+)
LOC110499605 LOC106590859 other downstream 2853063 42484544 ~ 42511247 (+)

Expression


Co-expression Network