Gene
RNA
| Item | Value |
|---|---|
| gene id | G1693340 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 39728646 ~ 39746677 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1936795 | False | 368 | lncRNA | 0.37 | 2 | 39728646 | 39742645 |
| TU1936793 | True | 414 | lncRNA | 0.36 | 2 | 39729820 | 39746677 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499468 | vdac2 | coding | upstream | 40724 | 39683595 ~ 39687922 (+) |
| LOC110499467 | LOC106589877 | coding | upstream | 50208 | 39671050 ~ 39678438 (+) |
| LOC110499546 | LOC106589879 | coding | upstream | 110266 | 39516539 ~ 39618380 (+) |
| LOC118942017 | NA | coding | upstream | 309695 | 39416869 ~ 39418951 (+) |
| LOC110499465 | LOC106589883 | coding | upstream | 532446 | 39124078 ~ 39196200 (+) |
| mgme1 | mgme1 | coding | downstream | 693244 | 40439921 ~ 40443984 (+) |
| ephx5 | LOC105009996 | coding | downstream | 708117 | 40454794 ~ 40467136 (+) |
| LOC110499485 | NA | coding | downstream | 741279 | 40487956 ~ 40490785 (+) |
| LOC118942071 | NA | coding | downstream | 752280 | 40498957 ~ 40502399 (+) |
| LOC110499549 | LOC106589914 | coding | downstream | 779316 | 40525993 ~ 40587582 (+) |
| G1693321 | LOC106589878 | non-coding | upstream | 60333 | 39665252 ~ 39668313 (+) |
| G1693316 | NA | non-coding | upstream | 70454 | 39656836 ~ 39658192 (+) |
| G1693313 | NA | non-coding | upstream | 72078 | 39638075 ~ 39656568 (+) |
| G1693312 | NA | non-coding | upstream | 87037 | 39637881 ~ 39641609 (+) |
| G1693289 | NA | non-coding | upstream | 149616 | 39576326 ~ 39579030 (+) |
| G1693575 | NA | non-coding | downstream | 25313 | 39771990 ~ 39772253 (+) |
| G1693582 | NA | non-coding | downstream | 31097 | 39777774 ~ 39778014 (+) |
| G1693584 | NA | non-coding | downstream | 31457 | 39778134 ~ 39778385 (+) |
| G1693695 | NA | non-coding | downstream | 132151 | 39878828 ~ 39879186 (+) |
| G1693704 | NA | non-coding | downstream | 142172 | 39888849 ~ 39889048 (+) |
| G1693184 | NA | other | upstream | 369011 | 39356345 ~ 39359635 (+) |
| G1692702 | NA | other | upstream | 888375 | 38839934 ~ 38840271 (+) |
| G1692568 | NA | other | upstream | 1016355 | 38710951 ~ 38712291 (+) |
| G1692406 | NA | other | upstream | 1159200 | 38568269 ~ 38569446 (+) |
| G1691992 | NA | other | upstream | 1500095 | 38228015 ~ 38228551 (+) |
| G1693699 | NA | other | downstream | 134672 | 39881349 ~ 39881843 (+) |
| G1693700 | NA | other | downstream | 135281 | 39881958 ~ 39882625 (+) |
| G1693914 | NA | other | downstream | 464845 | 40211522 ~ 40212953 (+) |
| G1695272 | NA | other | downstream | 1871350 | 41618027 ~ 41618505 (+) |
| LOC110499605 | LOC106590859 | other | downstream | 2762954 | 42484544 ~ 42511247 (+) |
