LOC118942958


Basic Information

Item Value
gene id LOC118942958
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 58372150 ~ 58378475 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958285.1
CCGTTCTGTTTCATGTCCGTTGTTTATTAAatcttcactccctctacctgcttctcgtctccagcgtCGATCCTCACACAGATAGTAACAGCATCGAGGAAACACAGAAGCCATTTTGTGCGTCAATCAATTTAGGTCGTCTCAGTTTGGGTGAATACTGTCACTTTGGCTGTTACCTTTGTCTTTTGACCCAAACTCACTGACAGACGGGTCAGTTACCCGGCAGGACGATGTGTCACTATGCTCAAAGCGACGCAGAGACCTGGGACATTCTCATGGACATATGTCAAGAGAAACCATCCTATcctgtctgtcctcctctgggacATTCTCATGGACATATGTCAAGAGAAACTATCCTATcctgtctgtcctcctctgggatATTCTCATGGACATATGTCAAGAGAAACCATCCTATCCTGTCTGTCCTCCTCTTGGACATTCTCATGGACATATGTCGAGAGAAACCATCCTATcctgtctgtcctcctctgggacATTCTCATGGACATATTTCAAGAAAAACCATCCTATcctgtctgtcctcctctgggatATCCTCATGGACAAATGTCAAGAGAAACCATCCTATcctgtctgtcctcctctgggatATTCTCATGGACATATGTCAAGAGAAACCATCCTATcctgtctgtcctcctctgggacATTCTCATGGACAAATGTCAAGAGAAACCATCCTATcctgtctgtcctcctctgggatATTCTCATGGACATATGTCAAGAGAAACCATCCTATcctgtctgtcctcctctggtATATTCTCATGGACATATGTCAAGAGAAACCATCCTATcctgtctgtcctcctctgggatATTCTCATGGACATATGTCAAGAGAAACCATcctatcctctctgtcctcctctgggatATTCTCATGGACATATGTCAAGAGAAACCATCCTATcctgtctgtcctcctctgggatATTCTCATGGACATATGTCAAGAGAAACCATCCTATcctgtctgtcctcctctgggatATTCTCATGGACATATGTCAAGAGAAACCATCCTATcctgtctgtcctcctctgggatATTCTCATGGAcATATGTCAAGAGAAACCATCCTATcctgtctgtcctcctctgtgaCATGCTCGTGGACACTATGTCAAGAGAAACCATCCGTAGCTTTTTTCCCCTCGTGGTTCACTTGGTTTCTTCCTTTTGTTCGTCTCAATCAATGTGGAAAAACAACGTGGAGGTAAATTGTGAGGCGAGAAAGGGGGATGTGAAACAAGCGCTTGAGAAAGCCAGAGTTTTCTCCTTCCATCAGTTCTTTAGTTTCCTAATGGCTCTCCCAAGTCCTAAGTGTGCGTTGTGCCAAAAGTTATTTGGTAAGATTTTGTCCATGTGTTGACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958285.1 True 1409 mRNA 0.45 2 58372150 58378475

Neighbor

gene id symbol gene type direction distance location
LOC118942959 NA coding downstream 173900 58195260 ~ 58198250 (-)
LOC110500946 fbxo24 coding downstream 303817 58056547 ~ 58068333 (-)
LOC110500947 zmynd15 coding downstream 316067 58053125 ~ 58056083 (-)
LOC110500948 zmynd15 coding downstream 319166 58043656 ~ 58052984 (-)
paqr9 paqr9 coding downstream 331787 58036498 ~ 58040363 (-)
LOC110500784 ing2 coding upstream 62692 58441167 ~ 58443946 (-)
LOC110500779 LOC106608532 coding upstream 120784 58499259 ~ 58508480 (-)
LOC110500778 LOC106608531 coding upstream 130101 58508576 ~ 58512400 (-)
LOC110500776 glu2b coding upstream 582786 58961261 ~ 59280662 (-)
LOC110500775 dmrta1 coding upstream 903694 59282169 ~ 59284125 (-)
G1757249 NA non-coding downstream 44198 58323716 ~ 58327952 (-)
G1757246 NA non-coding downstream 50123 58321474 ~ 58322027 (-)
G1757235 NA non-coding downstream 78759 58292985 ~ 58293391 (-)
G1757077 NA non-coding downstream 95604 57919944 ~ 58276546 (-)
G1757217 NA non-coding downstream 118107 58250689 ~ 58254043 (-)
G1757279 NA non-coding upstream 13217 58391692 ~ 58392526 (-)
G1757378 NA non-coding upstream 31478 58409953 ~ 58411684 (-)
G1757386 LOC106608527 non-coding upstream 37460 58415935 ~ 58416155 (-)
G1757391 LOC106608527 non-coding upstream 46430 58424905 ~ 58425222 (-)
G1757421 NA non-coding upstream 99428 58477903 ~ 58478581 (-)
G1757130 NA other downstream 329093 58042650 ~ 58043057 (-)
G1757074 NA other downstream 463016 57908139 ~ 57909134 (-)
G1757073 NA other downstream 469557 57902086 ~ 57902593 (-)
G1755322 NA other downstream 1964832 56406582 ~ 56407318 (-)
G1755310 NA other downstream 1981584 56390057 ~ 56390566 (-)
G1757692 NA other upstream 421699 58800174 ~ 58805825 (-)
G1758095 NA other upstream 813957 59192432 ~ 59195490 (-)
G1758845 NA other upstream 1645292 60023767 ~ 60024903 (-)
G1758890 NA other upstream 1744067 60122542 ~ 60123364 (-)
G1758915 NA other upstream 1809935 60188410 ~ 60225587 (-)

Expression


Co-expression Network