LOC110500776 (glu2b)


Basic Information

Item Value
gene id LOC110500776
gene name glu2b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 58961261 ~ 59280662 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958295.1
TGACCATGTTTCAGGAAGCGCTGATAGTTCACTGGGAAATGTTAAACCAGTTTGCTAGTTTTTGAGTGTAAAGAGCATCTTAACTGCTTTGCAGCCCTCTCTAAGAGAGTAATGTTCACAAACTGTTCCCTCGGACATTGTCATATTATCGTTGCTGTGGTTCTTTGGTCCATTTGTGTAGACTCGCGGAAAATCAGAGGAATTTCTTTATCGTATAAGAGGTTTTATAGAGAAAGAAAGTCCTTCCTGTGTATCGATGGGTCTAAAATGATCCCTTTTGACCAGGTGAATGACGACTACTGCGACTGCATGGATGGATCAGATGAACCAGGCACTGCGGCCTGTCCTACCGGCCGATTCTACTGCACCAACCTCGGCTACCGCTCTCACTACATACCATCTTCACGTGTCAATGATGGCATCTGCGACTGCTGTGACGCTTCAGATGAGTACAGAAGTCAAACGCCTTGCCAAAACACATGCAGGAATCTGGGACAGAGGGAGCGAGCGGAGGTGGAGGGCCAGACGAGGGTCCTGGGTGAGAGGCTGAGACTCAAGCAGCTGCTGATTGAGGAAGGCGTCCTCACCTGGCGGGAGAAACAGGCCCAGCTTCGCGACCTGCAGCGGGTCTCTGATGACCTACAGACCCAACTGGATGATCTCAGGAAGGAGGAGgcaaggaggaaggaggaggcagaCGCACTCAGAGAGCGGGAGATAGGGGCACGGGAAACGGCGGACAACAGTCCCACGAGTCACTATAGGCCTGAGTCTCCAATCAGCGTTTTCAAAGAGTTGGACAGCAATAGAGATGGAAGTATTACCGTGGATGAAGTCCAGGCGAAACTCTCTCCCGTCCAGGATGAGGAGCATGCTCTATCTGAGGATGAAGCCGTGGCTTTGCTAGGAGGGGCCCACCGGGTTGATCTCTCCAGGTTTGAGGAGACACTCTGGACCAGTCTGAGGACGGGTGACAGTGTAACAATCAAAGGGAGACGTGGTGTGCCAGGCAGTCTGGCAGATGAAGACCCCAACATCAAGGCCGCCGTGAGCGCTGCTGAAAAGGCGTCTGCTGATCTAAAGAGAGTTGAAGACGCGTACGAAACGGTGTACATGGAAATCAGGGACCTCAGGGAGAAACTTTCCATAGACTACGGATCAGAGAGAGAGTTTCTATTCCTGCATGACCAATGTTTCCAGCTGAAGGTCTATGAGTATATTTACGAGCTGTGTCCCTTCAGTCAAGTAACGCAGAAGAGTGCTTCAGGAGAAGTGGTGTCCTTAGGgAAGTGGGGGTCATGGGCGGGGCCACCAGAGAACCCATATTGCCAGATGAGGTATGAGAGTGGAGAGCCCTGCTGGCAAGGCCCTACCAGGAACACCATGGTCATGTTGATATGTGGGACAGAGACAGCCTTGAGATCGGTAAAGGAGCCCAGCAAATGCCAGTACGTCATGGAGCTTCAGACTCCCGTGTCCTGTCAGCCGGCGCTGAGGCAGCGGGGCGTACACAGTGAACTTTGACCCCCAGGGACCAAGTGGAGGGAGCCATGCAGCCCCCCATGCCGCTGGTGACAGACTTGTTCCGGGGCCACTCAGGCCCCAGTGTCCTCTGCCTTTGTGTCAGAACACATATCGCAATAATTGCTGTAGCTTTATAATATGTTTTTGTCTTCCGTTGTCTCGTTACCATGGTGTTTTTGTTCCTCCTGACTGTCACGCTGTTCATTTCCATTGTGTTTCGTTGAGCTTTGTGGATTGAGGAATTGAAGGAGTCTTTTCATGTAAAATGTTGTTCTAGAAATGTAGACATTTTAATTACACTTGCTGTTTGTGTTAGGTTTTACGCTTTGCAGTACGGGGAATAAGCTTCTCTGTCATTCCTGTTAAAACAATTATAAATCACAGTAGTTTCCAAACACTGTCTAATGACAGCATTAAGTCAATCTATGATCTTTGTAACAAAGAAATGACTCTGAATTGACTGAAAATAAAGGGACTATTTTGGATAGCA

Function

NR:

description
glucosidase 2 subunit beta-like

GO:

id name namespace
GO:0006491 N-glycan processing biological_process
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958295.1 True 2014 mRNA 0.50 15 58961261 59280662

Neighbor

gene id symbol gene type direction distance location
LOC110500778 LOC106608531 coding downstream 448861 58508576 ~ 58512400 (-)
LOC110500779 LOC106608532 coding downstream 452781 58499259 ~ 58508480 (-)
LOC110500784 ing2 coding downstream 517315 58441167 ~ 58443946 (-)
adam19a LOC106608525 coding downstream 570236 58169191 ~ 58391025 (-)
LOC110500775 dmrta1 coding upstream 1507 59282169 ~ 59284125 (-)
LOC110500772 rbpms coding upstream 94734 59375396 ~ 59440544 (-)
dctn6 LOC106608510 coding upstream 174053 59454715 ~ 59460683 (-)
trnay-gua-65 NA coding upstream 319859 59600521 ~ 59600607 (-)
trnay-gua-66 NA coding upstream 320537 59601199 ~ 59601285 (-)
G1758005 NA non-coding downstream 3755 58956490 ~ 58957506 (-)
G1757805 NA non-coding downstream 48092 58912967 ~ 58913169 (-)
G1757775 elavl2 non-coding downstream 55610 58903264 ~ 58905651 (-)
G1757803 NA non-coding downstream 59613 58899302 ~ 58901648 (-)
G1757790 elavl2 non-coding downstream 69196 58879935 ~ 58892065 (-)
G1758136 NA non-coding upstream 9321 59289983 ~ 59290229 (-)
G1758138 NA non-coding upstream 10914 59291576 ~ 59291911 (-)
G1758154 LOC100194703 non-coding upstream 25464 59306126 ~ 59306385 (-)
G1758156 NA non-coding upstream 26001 59306663 ~ 59306968 (-)
G1758194 NA non-coding upstream 59782 59340444 ~ 59340811 (-)
G1757692 NA other downstream 155436 58800174 ~ 58805825 (-)
G1757130 NA other downstream 918204 58042650 ~ 58043057 (-)
G1757074 NA other downstream 1052127 57908139 ~ 57909134 (-)
G1757073 NA other downstream 1058668 57902086 ~ 57902593 (-)
G1755322 NA other downstream 2553943 56406582 ~ 56407318 (-)
G1758845 NA other upstream 743105 60023767 ~ 60024903 (-)
G1758890 NA other upstream 841880 60122542 ~ 60123364 (-)
G1758915 NA other upstream 907748 60188410 ~ 60225587 (-)
LOC118942962 LOC106608456 other upstream 1078168 60352810 ~ 60370197 (-)
G1759103 NA other upstream 1247725 60528387 ~ 60528790 (-)

Expression


Co-expression Network