G1740740 (LOC106577771)


Basic Information

Item Value
gene id G1740740
gene name LOC106577771
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 44191447 ~ 44191706 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993541
CTGCATGAGTATCTCAGGGTCGTCCGGCACGACGTCTCCGTCCACTACGGGTCCGAAGGCGATGTGGTAGCGGGCCGGCTGAATGTCCTGATCCACCAGCTCCCTGAAGTTCTTCTTCCTCAGGCAGTCCACTAATTCTGCCGTCTCTGAGTGGCTGCAGCCCACTTTCCGGGCCAGGATCTTAGTGTACTTGAGGGGCTGGTAGTTGACCGACCAGCTGGAGATGGCTGAGCCACTCTGGGCTATGGCCCTCTGGAACa

Function

NR:

description
neuroligin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993541 True 260 lncRNA 0.59 1 44191447 44191706

Neighbor

gene id symbol gene type direction distance location
LOC110500520 LOC106608811 coding upstream 37378 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding upstream 63394 44126674 ~ 44128053 (+)
pop7 pop7 coding upstream 91521 44097937 ~ 44099926 (+)
LOC110500517 LOC106608821 coding upstream 141859 44039952 ~ 44050765 (+)
LOC118942933 NA coding upstream 171546 44012853 ~ 44019901 (+)
LOC110500528 tmem256 coding downstream 254480 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 coding downstream 269632 44461338 ~ 44480565 (+)
LOC110500530 NA coding downstream 346238 44537944 ~ 44556711 (+)
LOC110500854 LOC106608721 coding downstream 409157 44600863 ~ 44667561 (+)
chrnb1 LOC106608722 coding downstream 487959 44679665 ~ 44703721 (+)
G1740739 LOC106533889 non-coding upstream 1126 44189979 ~ 44190321 (+)
G1740738 LOC106608803 non-coding upstream 9821 44175192 ~ 44181626 (+)
G1740736 NA non-coding upstream 18196 44173009 ~ 44173251 (+)
G1740735 NA non-coding upstream 20182 44170831 ~ 44171265 (+)
G1740731 NA non-coding upstream 31380 44159830 ~ 44160067 (+)
G1740741 NA non-coding downstream 210 44191916 ~ 44192266 (+)
G1740742 NA non-coding downstream 1686 44193392 ~ 44193724 (+)
G1740743 NA non-coding downstream 4708 44196414 ~ 44196901 (+)
G1740744 nlgn2 non-coding downstream 5278 44196984 ~ 44197566 (+)
G1740750 NA non-coding downstream 15938 44207644 ~ 44207944 (+)
G1740453 NA other upstream 664721 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 721122 43469818 ~ 43470325 (+)
G1740398 NA other upstream 740280 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 801148 43389189 ~ 43390299 (+)
LOC110500499 ubil other upstream 923304 43267057 ~ 43268143 (+)
G1740752 NA other downstream 21080 44212786 ~ 44213230 (+)
fcer1g LOC106608748 other downstream 1252821 45444361 ~ 45449712 (+)
LOC110500870 LOC106608752 other downstream 1293566 45485247 ~ 45517233 (+)

Expression


Co-expression Network