G1756747


Basic Information

Item Value
gene id G1756747
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 57854787 ~ 57856719 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2011476
TTTTATTACATAAAAATTTTCCATACACACTATTTCATATTGCTTCAGACACAagttcatttttttttctctccccccccctgttAGAATAATTCCAGTTAAACAACTCTGTAACAAAATGTAGGTACAACATTTATGAAAATATAAATATCTCTAAACAGGTCAGTCCTGACCATACAAAGAATAAGGTAGAAACATTCATTACCAGTTTGTCAACTATTTGTTTTAGACATGTACGTTATTTAAAAGTCATTGAAGTTACATAACATAATACCATATATTGGTTTCCATATGGACACGTTCCAATATACTCTTTAAACTGGCATTCCAATATATCAAGTGGACTCAATGTCTTAGCAAAGATACAGGAAAATGTACTCTCATGGTTCAACATAATCACAGTAAAACACTCAAACAATTTGGTCATGATGTATAAGTAAGTACAAGCCTTATAACAAATGGACCGTTGTCAACAGAACAGCACATCAAACTAAGATCTGAACTTTTCTCAAATACACTTATAGGATATTTCTAGACTGAGAATGTTTGCTTTGAAATATATAATAATGAAATATGTTAAAGCTTAATACTGCTACTTAAGTTCTTTAGTGGGCCAACGTTTTTCAACTGTGGAAAATAAGTACACAAACAATTAGACAGAATAGCCCTTAAAAGGTTTAGAGAAAACCAAAACGCTAGTATCGACTGATGATATCCTTTCGTTTCAACTCTGAATCCCTGTGACTATGTTAAACAAAGCCACATACCTGTTTAAAGAGCAAAGACAAACGATTATCAATATGACTAATAAATAAACCCCGAATGTCCTTCATAACGTCCCGACGCAAAACAAAACCTTGATAATCTAACACGTTTCAATACTTTCACCACATTGTGCCTATTAtcactattttctctctctctctctctctctaaatgttAAGACAATTtaagtttctctctctctctctctctaaatgttAAGACAATttaagtttctctctctctctctctctctctctctctctctctctctctctaaatgttAAGACAAtttaagtttttttttctctctctctctctctctctctctctctaaatgttAAGACAATTtaagtttttttctctctctctttctctctaaataTTAAgactatttttttaatttttcttTTACTGAAGGTAAAAGCTGTAAAACAGAAGACTGTTTAAGGCGTGGATACGAACAGTGAGATGCTACACTGAGAAATTCATGAACCGGAAACTGCAGGTAAAGTTGGACCAGCTGTTAATACATCTATTTATAATCTCAAACTCAACACGGCCACTAAAGTACCTTAATCCTcaactttttatttttgtattttttttttttttttaaacatttttttgatcattttaaaatcaatcaaattgattatGTATGCTAAATTAGTATATGTATTTGTATATAGTGTGTCTACGAACTCCCTGCAATTCTCAGTAGTCTATACGAAAATAAAAGACATTTCAAAAACCAGGCACTCACTTTGATTGCATTAAGCACAACATAACATGTTTTTTTAAGGAGTTGCACGAATTGCAGCAGCCaaaagagatatatatatatatatacacactaccattCATAAATGtggggtcacttcgaaatgtccttgtttttgaaagaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2011476 True 1671 lncRNA 0.32 2 57854787 57856719

Neighbor

gene id symbol gene type direction distance location
zmp:0000000660 arap2 coding downstream 318003 57279508 ~ 57536784 (-)
LOC118942954 NA coding downstream 1562112 56291672 ~ 56292747 (-)
LOC118942811 NA coding downstream 1623745 56230477 ~ 56231042 (-)
LOC118942810 NA coding downstream 1753916 56100143 ~ 56100871 (-)
LOC118942809 NA coding downstream 2199714 55654018 ~ 55655073 (-)
rell1 LOC106608524 coding upstream 48035 57904754 ~ 57959296 (-)
LOC118942957 NA coding upstream 174292 58029260 ~ 58035943 (-)
paqr9 paqr9 coding upstream 179779 58036498 ~ 58040363 (-)
LOC110500948 zmynd15 coding upstream 186937 58043656 ~ 58052984 (-)
LOC110500947 zmynd15 coding upstream 196406 58053125 ~ 58056083 (-)
G1756743 NA non-coding downstream 10997 57842046 ~ 57843790 (-)
G1756656 NA non-coding downstream 96722 57757756 ~ 57758065 (-)
G1756654 NA non-coding downstream 99711 57754788 ~ 57755076 (-)
G1756647 NA non-coding downstream 105052 57749536 ~ 57749735 (-)
G1756639 NA non-coding downstream 114867 57739684 ~ 57739920 (-)
G1757040 NA non-coding upstream 11589 57868308 ~ 57871100 (-)
G1757067 NA non-coding upstream 42653 57899372 ~ 57899926 (-)
G1757076 NA non-coding upstream 62964 57919683 ~ 57976116 (-)
G1757077 NA non-coding upstream 63225 57919944 ~ 58276546 (-)
G1757095 NA non-coding upstream 106078 57962797 ~ 57996851 (-)
G1755322 NA other downstream 1447469 56406582 ~ 56407318 (-)
G1755310 NA other downstream 1464221 56390057 ~ 56390566 (-)
G1754243 NA other downstream 2580838 55272218 ~ 55273949 (-)
LOC110500749 s100p other downstream 2747206 55106685 ~ 55107622 (-)
LOC110500893 tada2b other downstream 2888682 54961826 ~ 54966157 (-)
G1757073 NA other upstream 45367 57902086 ~ 57902593 (-)
G1757074 NA other upstream 51420 57908139 ~ 57909134 (-)
G1757130 NA other upstream 185931 58042650 ~ 58043057 (-)
G1757692 NA other upstream 943455 58800174 ~ 58805825 (-)
G1758095 NA other upstream 1335713 59192432 ~ 59195490 (-)

Expression


Co-expression Network