G1758095


Basic Information

Item Value
gene id G1758095
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59192432 ~ 59195490 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2013078
ctctttctctcactctatcactctctctctttctctatcactctctctttctctcactatataactctctctttctctcactctctctctctttctctcactctagcactctctctcactctttctctctctctcgctctttctatatcactctctttctctctatcactctttCTCTATATcaccctttctctcactctattactctctctctttctctatccctctctctttctctcactatcactctctctctctctttctctctctttttctatcactctctctctctctctctttctctctctttttcttctgtcactctctttattctctctctctttgtttgtg
>TU2013080
TTTACCATGTCTCACAGCCTCATGTAGACTCCCTGTATGAGGGACAGTTTTATGGAGTTTACCATGTCTCACAGCCTCATATAGGTGTTGACACACTCGCCCGGTTAACCacaaggttgctggttcaaacccTGCTTCAGCTATTCCCCCTGTAAGTGCTTCTATACCGCTATATGAATCAAAGGTCAGTCCAGAGGCCGACGTTATCTGTTAGCATTTCAatacaatgggggggggggggggatcccctGATAATATCAGGACGGCTCACCAGGATGCCATGTGCTGGGTTAGATATACAGTGACGTCAGCAATTCTTTGTTTtaggtattctattctgttctgtcttATGCTTCTTTAGAAACTGGACGATGTTGGGCAGTTTGAAGTGTGGTTCGGTGCTTGACCTGACCAGCAGGAAATGGTTTCTGGGTACCCAGCCGGACCAATTTGACTGTGTCACACATCAAATATTTTCAGTAGAGGCGAACCATCACGTTTTTTTTGGGTAGTACCGAGTACTTCGTGTTTCtcagagaatctccattgaaaatCCTGTTTAGTCCAAGATTAGGTTTAATCTGTGACTGGGGGAAACTGCCCCGTAATGTCTGTTTCTTTAGTCCAAGATTAGGTTTAATCTGTGACTGGGGGAAACTGCCCCGTAATGTCTGTTTCTTTAGTCCAAGATTAGGTTTAATCTGTGACTGGGGGAAACTGCCCCGTAATGTCTGTTTCTGGTTTGAACAGTACCTATGGATGTTAAAAGGGATCTTAAATGTATTATATGACTCCTCTACCCGattactctcctcctccctgcacATCTTTCTTACAGTGTATAAACAATACAATAAAACCACCATAATCATCACCCTTCTTGTTTTCTGAATGTCTAACTCTACCCGAACACCGGAAAGCCATCCTCTCAATTTTATAGTTCTCCGGTGCAGGCTCCAATGATCTCCTTTGCCGTTAGTGAAGGGCACACTTCATTTCCTCTAATTTTGATGTGAAACGGTGACTCACCCCACCACTTGCTCTGACCCCGACGGCGCTATACCGACACGTTTACCGGCGTTTTGTTGGTGGCTGgtgtcctccttcctcctccttgttCTCCTCATCGGTGTCTTTGCTCAACTTCCGTTTTGACATCGTTCGTCCTGCCGAGCAACAGGTCATGGTGACACAGGGGGTTCTGTTCTACTGCTATGACGACACATTTGATGTGGAAGTGGCAGCCCTTGTCTACCATGCATtctctctatatcactctctctttctctcactctatcactctctctctctttctctatcattctctctttctctcactctagcactctctctttctctcactctagcactctctctcactctttctctctctctaccatgcattctctctctatcactctctagcactctctctcactctttctctatcactctctctttctctcactctatcactctctctctttctctatcactctctctctctttctctctctttctctatcactctctctttctctcacgctatcactctctctctctctttctctctctttctctatcactctctctttctctcactatcactctctctctcactctcactctctctctctctttctctctctttctctatatctctctctttctctcactatcactctctctttctctcactatcactctctctttctctatccctctctctttctctcactatcactctctctctctctttctctctctttttctatcactctctctctctctctctttctctctctttttcttctgtcactctctttattctctctctctttgtttgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2013078 False 351 lncRNA 0.40 2 59192432 59193092
TU2013080 True 1848 TUCP 0.45 3 59192432 59195490

Neighbor

gene id symbol gene type direction distance location
LOC110500778 LOC106608531 coding downstream 680032 58508576 ~ 58512400 (-)
LOC110500779 LOC106608532 coding downstream 683952 58499259 ~ 58508480 (-)
LOC110500784 ing2 coding downstream 748486 58441167 ~ 58443946 (-)
LOC118942958 NA coding downstream 813957 58372150 ~ 58378475 (-)
LOC118942959 NA coding downstream 994182 58195260 ~ 58198250 (-)
LOC110500775 dmrta1 coding upstream 89077 59282169 ~ 59284125 (-)
LOC110500772 rbpms coding upstream 182304 59375396 ~ 59440544 (-)
dctn6 LOC106608510 coding upstream 261623 59454715 ~ 59460683 (-)
trnay-gua-65 NA coding upstream 407429 59600521 ~ 59600607 (-)
trnay-gua-66 NA coding upstream 408107 59601199 ~ 59601285 (-)
G1758087 NA non-coding downstream 13687 59172862 ~ 59178745 (-)
G1758088 NA non-coding downstream 14457 59173634 ~ 59177975 (-)
G1758089 NA non-coding downstream 17435 59174415 ~ 59174997 (-)
G1758086 NA non-coding downstream 28150 59163795 ~ 59164282 (-)
G1758036 NA non-coding downstream 178369 59012893 ~ 59014063 (-)
G1758096 NA non-coding upstream 2722 59195814 ~ 59196267 (-)
G1758099 NA non-coding upstream 9953 59203045 ~ 59203926 (-)
G1758105 NA non-coding upstream 22993 59216085 ~ 59216586 (-)
G1758111 NA non-coding upstream 34859 59227951 ~ 59228345 (-)
G1758123 NA non-coding upstream 71077 59264169 ~ 59264513 (-)
G1757692 NA other downstream 386607 58800174 ~ 58805825 (-)
G1757130 NA other downstream 1149375 58042650 ~ 58043057 (-)
G1757074 NA other downstream 1283298 57908139 ~ 57909134 (-)
G1757073 NA other downstream 1289839 57902086 ~ 57902593 (-)
G1755322 NA other downstream 2785114 56406582 ~ 56407318 (-)
G1758845 NA other upstream 830675 60023767 ~ 60024903 (-)
G1758890 NA other upstream 929450 60122542 ~ 60123364 (-)
G1758915 NA other upstream 995318 60188410 ~ 60225587 (-)
LOC118942962 LOC106608456 other upstream 1165738 60352810 ~ 60370197 (-)
G1759103 NA other upstream 1335295 60528387 ~ 60528790 (-)

Expression


Co-expression Network