G1758099



Basic Information


Item Value
gene id G1758099
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59203045 ~ 59203926 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2013085
CACCAATACCCTGTTACACTCtgacctctctaccctctccatcaTCATGGTACATCAATACCCTGTTACACTCtgacctctctaccctctccatcaTCATGGTACATCAATACCCTGTTACATATCtgacctctctaccctctccatcaTCATGGTACATCAATACCCTGTTACACTCtgacctctctaccctctccatcaTCATGGTACATCAATACCCTGTTACACTCtgacctctctaccctctccatcaTCATGGTACATCAATACCCTGTTACACTCtgacctctctaccctctccatcaTCATGGTACATCAATACCCTGTTACACTCtgacctctctaccctctccatcaTCATGGTACACCAATACCCTGTTACACTCTGACCTGTCTACCCTCTCCATCATCATGGTACACCAATACCCTGTTACACTCtgacctctctaccctctccatcaTCATGGTACATCAATACCCTGTTACACTCTGACctctctaccctctccatcaTCATGGTACACCAATACCCTGTTACACTCTGACCTGTCTACCCTCTCCATCATCATGGTACATCAATACCCTGTTACACTCTGACCTGTCTACCCTCTCCATCATCATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2013085 True 622 lncRNA 0.47 2 59203045 59203926

Neighbor


gene id symbol gene type direction distance location
LOC110500778 LOC106608531 coding downstream 690645 58508576 ~ 58512400 (-)
LOC110500779 LOC106608532 coding downstream 694565 58499259 ~ 58508480 (-)
LOC110500784 ing2 coding downstream 759099 58441167 ~ 58443946 (-)
LOC118942958 NA coding downstream 824570 58372150 ~ 58378475 (-)
LOC118942959 NA coding downstream 1004795 58195260 ~ 58198250 (-)
LOC110500775 dmrta1 coding upstream 78243 59282169 ~ 59284125 (-)
LOC110500772 rbpms coding upstream 171470 59375396 ~ 59440544 (-)
dctn6 LOC106608510 coding upstream 250789 59454715 ~ 59460683 (-)
trnay-gua-65 NA coding upstream 396595 59600521 ~ 59600607 (-)
trnay-gua-66 NA coding upstream 397273 59601199 ~ 59601285 (-)
G1758096 NA non-coding downstream 6778 59195814 ~ 59196267 (-)
G1758095 NA non-coding downstream 9953 59192432 ~ 59195490 (-)
G1758087 NA non-coding downstream 24300 59172862 ~ 59178745 (-)
G1758088 NA non-coding downstream 25070 59173634 ~ 59177975 (-)
G1758089 NA non-coding downstream 28048 59174415 ~ 59174997 (-)
G1758105 NA non-coding upstream 12159 59216085 ~ 59216586 (-)
G1758111 NA non-coding upstream 24025 59227951 ~ 59228345 (-)
G1758123 NA non-coding upstream 60243 59264169 ~ 59264513 (-)
G1758136 NA non-coding upstream 86057 59289983 ~ 59290229 (-)
G1758138 NA non-coding upstream 87650 59291576 ~ 59291911 (-)
G1757692 NA other downstream 397220 58800174 ~ 58805825 (-)
G1757130 NA other downstream 1159988 58042650 ~ 58043057 (-)
G1757074 NA other downstream 1293911 57908139 ~ 57909134 (-)
G1757073 NA other downstream 1300452 57902086 ~ 57902593 (-)
G1758845 NA other upstream 819841 60023767 ~ 60024903 (-)
G1758890 NA other upstream 918616 60122542 ~ 60123364 (-)
G1758915 NA other upstream 984484 60188410 ~ 60225587 (-)
LOC118942962 LOC106608456 other upstream 1154904 60352810 ~ 60370197 (-)
G1759103 NA other upstream 1324461 60528387 ~ 60528790 (-)

Expression



Co-expression Network