G1758424



Basic Information


Item Value
gene id G1758424
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59619228 ~ 59622300 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2013471
ggttcaaatctggcttgaaggattgattgtactttttcttgtggcttacgccaactttttgacagcagtgtaccatgacatgtgctcgacaaaaaaatatctttccctgagagaagaaatgttcacttgttgacctttgataggaatgttggtatagcagcagagagttctcgagattgcaacagtccttaggtcgctgactcagaagagtataactttttctgcagttgtgccaagtttttgacttatgcctagtgtttccccaaaagcaagtcattccctgagcgggaatcaaacccaggcagcggtggtaaaagaaccgaatcctaaccactagaccaacagggagagagaaaaatgcattttgcagt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2013471 True 371 lncRNA 0.43 2 59619228 59622300

Neighbor


gene id symbol gene type direction distance location
trnay-gua-90 NA coding downstream 414 59618728 ~ 59618814 (-)
trnay-gua-89 NA coding downstream 1090 59618052 ~ 59618138 (-)
trnay-gua-88 NA coding downstream 1768 59617374 ~ 59617460 (-)
trnay-gua-87 NA coding downstream 2446 59616696 ~ 59616782 (-)
trnay-gua-86 NA coding downstream 3125 59616017 ~ 59616103 (-)
trnay-gua-96 NA coding upstream 658 59622958 ~ 59623044 (-)
trnay-gua-97 NA coding upstream 1335 59623635 ~ 59623721 (-)
trnay-gua-98 NA coding upstream 2013 59624313 ~ 59624399 (-)
trnay-gua-99 NA coding upstream 2690 59624990 ~ 59625076 (-)
trnay-gua-100 NA coding upstream 3369 59625669 ~ 59625755 (-)
G1758364 NA non-coding downstream 86010 59516262 ~ 59533218 (-)
G1758362 NA non-coding downstream 104366 59514614 ~ 59514862 (-)
G1758317 NA non-coding downstream 188471 59429126 ~ 59430757 (-)
G1758314 NA non-coding downstream 194213 59423685 ~ 59425015 (-)
G1758294 NA non-coding downstream 231256 59383531 ~ 59387972 (-)
G1758428 NA non-coding upstream 12283 59634583 ~ 59637718 (-)
G1758412 NA non-coding upstream 51710 59674010 ~ 59685333 (-)
G1758445 NA non-coding upstream 76994 59699294 ~ 59704011 (-)
trnar-ucu-120 NA non-coding upstream 114841 59737141 ~ 59737451 (-)
G1758587 NA non-coding upstream 239657 59861957 ~ 59862860 (-)
G1758095 NA other downstream 423738 59192432 ~ 59195490 (-)
G1757692 NA other downstream 813403 58800174 ~ 58805825 (-)
G1757130 NA other downstream 1576171 58042650 ~ 58043057 (-)
G1757074 NA other downstream 1710094 57908139 ~ 57909134 (-)
G1757073 NA other downstream 1716635 57902086 ~ 57902593 (-)
G1758845 NA other upstream 401467 60023767 ~ 60024903 (-)
G1758890 NA other upstream 500242 60122542 ~ 60123364 (-)
G1758915 NA other upstream 566110 60188410 ~ 60225587 (-)
LOC118942962 LOC106608456 other upstream 736530 60352810 ~ 60370197 (-)
G1759103 NA other upstream 906087 60528387 ~ 60528790 (-)

Expression



Co-expression Network