LOC110501266 (LOC106581655)


Basic Information

Item Value
gene id LOC110501266
gene name LOC106581655
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 4610896 ~ 4614658 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578658.2
CACAACCAGTTTCCTGACCCGTTAAAGTACCAATGCATCCAGCCCCAACCGCCCCTCTCTGACTCAAGCCTGTGTATTGTCAGAGGTTGTCTGTGTGAAGTCATTGTTACCATGGCATGGAGTTCCAACAGCACCAAACTGGACAACACCACCTTGTCCCTGTTCCAGAACGTGACAGCCAGTACAGCAATCTCCATTGTCTACATTGTGGTCACCATCATCAACCTGGTAGGAAACAGCCTCTCCATGTGGCTCCTCCTCTTCCATACGTCTCCCAAAACTCCCTCCATCATCTTCATGATCAACCTGACCTTGACTGACCTGACCTTGGGCCTCGTCCTGCCCTTCCAGATCATGTATCAGATGCAAGGGTATAATTGGAGCCTGGGCCCGGGCATGTGCAGGCTCCTGACCCTGGTGTTCTTTGCCAACATGTACTGCTCAATTCTAACTATGACCGCCATCAGTGGAGACCGCTACCTGGGCATCTGCCGGCCCATGCTCTTCTGTGAGACCAGGGAAAGGAAGTCATTCGCTGTGATTGTCTGCTTCGCCATGTGGACAGTCGTCCTATTGGTCCTGTACCCACTCACTATAACCGACCTGACGTTCCACGTTCCAGAACTCAGGATTACCACCTGCTTCGACGTTCTGAAGAGGGACATGCTTCCATCCATGGTGGCCTGGGCTGCCTTCCTCCTTGCACTGTTtgtcatcctcttcctcatcccgTTCTGCATCACTGTTTTCTGCTACATCAGCATCATCCGCAAGCTGGCCCGAGACTCCAAGACCAAACAGAAGGATAAGGCTATTGGTCTCGCCGTCACCGTCCTAACGGTCTTTACGCTCTGCTTCACTCCCAACAACATCCTCCTCCTGGCTCACACCATCCGGAGGCTCTTCTACGGGGACTCCCTCTACATGGCCTACAAGCTGACTCTCTCCCTCAGTTGCTTCAACAGCTGCCTGGACCCCTTCATCTACTACTTTGCCTCTAGGGAGTTCCGGAAGAAGTTGAGGCAGATGCTAAGGCTGAGAACATCGAGCAGTCTGGACACAGGGAAGACAGACCTGCACAGAGAGAGCCTGTACTCCGCCCAGTATGTGTCTGAGGGACAGGGTAGAGAGAACGGGAGAGTGTCTGTTAAACAACACTGTTAAAAAACAGAGAGAGGGCctccagagtggtgcagcggtccaaggcactgcattgcagtgttagaggcgtcattacagactCGGgttctgtcgcagccagccgtgaccgggagacacatgaggcggcgcacaattggccaagtgtcgtccaggttaggggagggtttggccggccgggatgtcttTGTTCCATTacactctagcaactccttgtggtgggccaggcgcatgcacgTTCCTCTGACagattggtgcagctggcttccgggttaagcgagcagtgtgtcaagaaacaATGTGGCTttgcagggtcgtgtttcagaggacgaaTGGGTCTTGACCTTCGCCTTTCCCGAGTCCGCATGGGCGTTGCAGCGATGGGACTAGACTGTAACtacaaattggggagaaaagggggtaaaattacaacaacaaaaactgaGAGAGATGTCATTTTGTAATATCCCCTGTTCAGATAATTTCACAGGAATGTTTTTGTGTGCTGTATATAGACCCAGTAACAAACCAGGCTAGATGGTGCTTCAAAAAGTTAGTAAAATAGGGTAATTTATTTTGTGAAGGACTGTAGCAAACTTGCATTAAGATATCAATGAGATGTGTGTGGCTAAGTGAAAGCTAGGCTCCTTTTACCGCAAATGTGATCTCTGCCTCCTGCCAATTCGGGCGGattcattgtttcattgtgtgaattaTTAAACCTACCTACTGGGGTCATTTCAACGAAATTACATTGAAGCAATGTGGAATAGACAATGAATTGATTTCTCTGCCCAGTGGGTACCTTTGTTAAATGTTTATCCATTCCCAACCAATTATATCACCAGTAATGAATTTAATGTTAATCTCCGTCATCTAGAACGTTAGGGTGTTTAAATCACGAAATTCTATTCATTCATGAAATAATTATCAATTTACCATTCTCATTCTCTGAGATTTTGATGTCATTTTCCCAATGTGGAACATTGGAACACTCCATaagtaaatatatttaaaaaattataataattgcacttgtcttttcctactagcactgacttagCTGATTAACTTCTTATTGAGGAATTTCCTttttactatgactgtgatatatgGTCGTCCcatctagctatcttaagataaatgtagtgt
>XM_021578657.2
ACTGCTCGGTCTCTTTGCTTTACATTTCATACAGAGATACTTCAATTTGGACTGTTAATGTTAAAATGTCAGCCTAAAATGTATAATTGCTCTTTGTTACAATTAGGGATAACATTGTCTCAGACAATAGGGATAATATTCAgatatattttattatatattttaagTATAGAATCAAGGCACTCATTCAGGTGGGCACCTGTGCTATTTACTTTTGGCAAAGCTTGTGCTTTGGTTATGTAGTTTGTATAAGGTTAGAGCACCGCTTCACTTGCACATGGAGGGGAATTCATTGTGCAAGAGCCAATGCACTGTTGGAATATCGTACACTTTTGGAATTTCACATTTCGTACTGCACTGGAAATGTGTTTTATAGTATATAGAAAGAGCCAGCAGAGGAAACACATGAGAGGTTTTGGCTCGTCTAATGTGACACAAGAAGCCTCCGAAACAGTCACATTTGGTGTGTGGTTATTTACCCCCTCACAATGTGTGGGTGAAGGGATGGCAGTGTGGTAGAGGTTCACTCCAGAGTCAAAAAGCATATCAATTGTCACCACAACAATTGCCAAATATTACACTCAGTGCAAAAATTATAGATTTAATAGACAATCTTTTTTTATTACAACATCTATAACACATGGTCTAGTTCATATTTGCACAGGACTAGTATTACTAGATCATTATAATTATTGCCCCATGTAATACTTTTTGTCATTCAGTATTTACCATTATGATTTTCCTATTGTAAACGATGAGCTAGATCAACGGCACATGTGGAGGACTCATACAAGGTAATGTGGACGGAAAAGGAAATGCATTGCTTTACAATGACCACCAGGGTGTACCATTTCCATGCATACTAAATGCTTGCACTTCTGGTGACTTGACCTACATTTCCTACTCTATGAATATGACCATAGCGTATTATTTATGGTCTTTGTGGTCAAATCATACTGCATTGCTAGCAGTATGATTTGAGTTGTGACAAGCTACATCACATTACACTTTAGCTTGATGTATTTAGCTAGTTACTGTATTattcccctttcatctgtggtATCATACCTAGCCTGGCTCGCTAGCATAATAAATGAATGTTGTAAAACAAAAAGTATCTACCAAACTTGTCGGACCTGGTACCTTGTCCAAAACAAACACTCAGAATTTAACAGGTTTTAATTCATTGGCACTATAGTCTGCCAAATCTTGTTTTAAAACGGTTTTCAGATCCCAGACAGGACATGCTACCTTTTTACATGAATCTAAATGTCTGCCTGATCATAGGTTGTCTGTGTGAAGTCATTGTTACCATGGCATGGAGTTCCAACAGCACCAAACTGGACAACACCACCTTGTCCCTGTTCCAGAACGTGACAGCCAGTACAGCAATCTCCATTGTCTACATTGTGGTCACCATCATCAACCTGGTAGGAAACAGCCTCTCCATGTGGCTCCTCCTCTTCCATACGTCTCCCAAAACTCCCTCCATCATCTTCATGATCAACCTGACCTTGACTGACCTGACCTTGGGCCTCGTCCTGCCCTTCCAGATCATGTATCAGATGCAAGGGTATAATTGGAGCCTGGGCCCGGGCATGTGCAGGCTCCTGACCCTGGTGTTCTTTGCCAACATGTACTGCTCAATTCTAACTATGACCGCCATCAGTGGAGACCGCTACCTGGGCATCTGCCGGCCCATGCTCTTCTGTGAGACCAGGGAAAGGAAGTCATTCGCTGTGATTGTCTGCTTCGCCATGTGGACAGTCGTCCTATTGGTCCTGTACCCACTCACTATAACCGACCTGACGTTCCACGTTCCAGAACTCAGGATTACCACCTGCTTCGACGTTCTGAAGAGGGACATGCTTCCATCCATGGTGGCCTGGGCTGCCTTCCTCCTTGCACTGTTtgtcatcctcttcctcatcccgTTCTGCATCACTGTTTTCTGCTACATCAGCATCATCCGCAAGCTGGCCCGAGACTCCAAGACCAAACAGAAGGATAAGGCTATTGGTCTCGCCGTCACCGTCCTAACGGTCTTTACGCTCTGCTTCACTCCCAACAACATCCTCCTCCTGGCTCACACCATCCGGAGGCTCTTCTACGGGGACTCCCTCTACATGGCCTACAAGCTGACTCTCTCCCTCAGTTGCTTCAACAGCTGCCTGGACCCCTTCATCTACTACTTTGCCTCTAGGGAGTTCCGGAAGAAGTTGAGGCAGATGCTAAGGCTGAGAACATCGAGCAGTCTGGACACAGGGAAGACAGACCTGCACAGAGAGAGCCTGTACTCCGCCCAGTATGTGTCTGAGGGACAGGGTAGAGAGAACGGGAGAGTGTCTGTTAAACAACACTGTTAAAAAACAGAGAGAGGGCctccagagtggtgcagcggtccaaggcactgcattgcagtgttagaggcgtcattacagactCGGgttctgtcgcagccagccgtgaccgggagacacatgaggcggcgcacaattggccaagtgtcgtccaggttaggggagggtttggccggccgggatgtcttTGTTCCATTacactctagcaactccttgtggtgggccaggcgcatgcacgTTCCTCTGACagattggtgcagctggcttccgggttaagcgagcagtgtgtcaagaaacaATGTGGCTttgcagggtcgtgtttcagaggacgaaTGGGTCTTGACCTTCGCCTTTCCCGAGTCCGCATGGGCGTTGCAGCGATGGGACTAGACTGTAACtacaaattggggagaaaagggggtaaaattacaacaacaaaaactgaGAGAGATGTCATTTTGTAATATCCCCTGTTCAGATAATTTCACAGGAATGTTTTTGTGTGCTGTATATAGACCCAGTAACAAACCAGGCTAGATGGTGCTTCAAAAAGTTAGTAAAATAGGGTAATTTATTTTGTGAAGGACTGTAGCAAACTTGCATTAAGATATCAATGAGATGTGTGTGGCTAAGTGAAAGCTAGGCTCCTTTTACCGCAAATGTGATCTCTGCCTCCTGCCAATTCGGGCGGattcattgtttcattgtgtgaattaTTAAACCTACCTACTGGGGTCATTTCAACGAAATTACATTGAAGCAATGTGGAATAGACAATGAATTGATTTCTCTGCCCAGTGGGTACCTTTGTTAAATGTTTATCCATTCCCAACCAATTATATCACCAGTAATGAATTTAATGTTAATCTCCGTCATCTAGAACGTTAGGGTGTTTAAATCACGAAATTCTATTCATTCATGAAATAATTATCAATTTACCATTCTCATTCTCTGAGATTTTGATGTCATTTTCCCAATGTGGAACATTGGAACACTCCATaagtaaatatatttaaaaaattataataattgcacttgtcttttcctactagcactgacttagCTGATTAACTTCTTATTGAGGAATTTCCTttttactatgactgtgatatatgGTCGTCCcatctagctatcttaagataaatgtagtg

Function

NR:

description
P2Y purinoceptor 8-like isoform X1

GO:

id name namespace
GO:0035589 G protein-coupled purinergic nucleotide receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0045028 G protein-coupled purinergic nucleotide receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578658.2 False 2310 mRNA 0.48 3 4610896 4614658
XM_021578657.2 True 3511 mRNA 0.44 2 4610897 4614567

Neighbor

gene id symbol gene type direction distance location
si:ch211-269e2.1 LOC106581653 coding downstream 1685 4562223 ~ 4609211 (-)
shox shox coding downstream 316737 4281978 ~ 4294159 (-)
fgf14 fgf14 coding downstream 836329 3447431 ~ 3774567 (-)
nalcn nalcn coding downstream 1298856 3016850 ~ 3312040 (-)
LOC118943626 NA coding downstream 1420602 3188097 ~ 3190294 (-)
LOC110501268 cssa25h2orf47 coding upstream 38823 4653481 ~ 4659691 (-)
LOC110501269 LOC106581656 coding upstream 60857 4675515 ~ 4756261 (-)
LOC110502104 NA coding upstream 175667 4790325 ~ 4792407 (-)
LOC110501274 LOC106581657 coding upstream 179368 4794026 ~ 4917972 (-)
LOC110501278 LOC106581673 coding upstream 563129 5177787 ~ 5195340 (-)
G1767972 NA non-coding downstream 136812 4472290 ~ 4474084 (-)
G1767621 NA non-coding downstream 167622 4443034 ~ 4443274 (-)
G1767589 NA non-coding downstream 197062 4413432 ~ 4413834 (-)
G1767442 NA non-coding downstream 297283 4313365 ~ 4313613 (-)
G1767440 NA non-coding downstream 299695 4310744 ~ 4311201 (-)
G1768106 NA non-coding upstream 144209 4758867 ~ 4824894 (-)
G1768198 NA non-coding upstream 293656 4908314 ~ 4935666 (-)
G1768230 NA non-coding upstream 334731 4949389 ~ 4950484 (-)
G1768237 NA non-coding upstream 342317 4956975 ~ 4957225 (-)
G1768402 NA non-coding upstream 414091 5028749 ~ 5031511 (-)
G1766126 NA other downstream 1284553 3325721 ~ 3326343 (-)
klf5b LOC106586047 other downstream 3183176 1420358 ~ 1428026 (-)
G1763459 NA other downstream 3391179 1218802 ~ 1219717 (-)
G1762219 LOC106593246 other downstream 4505539 86357 ~ 105357 (-)
G1769281 NA other upstream 1186103 5800761 ~ 5825307 (-)
G1769618 NA other upstream 1345492 5960150 ~ 5960815 (-)
G1771092 NA other upstream 2637126 7251784 ~ 7256717 (-)
G1771426 LOC106582012 other upstream 2847555 7462213 ~ 7464692 (-)
LOC110501323 LOC106581977 other upstream 4010364 8624815 ~ 8684792 (-)

Expression


Co-expression Network