si:dkey-4e7.3 (LOC106582031)


Basic Information

Item Value
gene id si:dkey-4e7.3
gene name LOC106582031
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 8083817 ~ 8092866 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578794.2
GCAGCGCACGGATGGCCCAACCCGGAAACGAGAGAAAGGTCAATGACTGCGGCAAGATTATCGAGATTCAATGTTTATAGCGCTTTGGAGGTTGTTCATCTTTACCGTAGACATACACGGAGGTTAGCGGAAAGCAGGCCGCTCAAAGGTTCCCAGTTGCATGTGACGGTCACTTGTTAGCCAGGCCAAGAGGAGTAGCAGCCTGTCCACACCGACACAGCCCAGTCCTATTCTATTCAACTACAGGCTCCAGTATGAGTAGTAAGAAGCTGCTGGTGGATGTGGACTGTGGGGTGGATGATGCTCAGGCTATCATGATGGCACTGGCCACCCCtaatgtagaggtcctgggcatCACCTGTGTCCACGGCAACACCAATGTGGAGAACGTGTGCAAGAACACGCTGCGGGTGCTCCAAGTCTGCAACAGACTGGAGatcCCGGTATTCCGTGGTGCTGCCAAGCCTATCCTGGGGAATGTGATCAGTGCGGGAAACTTCCATGGCCAGGACGGGCTGGGGGATGCTCCAGACCCAAACGCTCCGGGGCTGGACATGCTGCAGATGGAAGGAGCGGTATCTGCACTGATCCGGATAGTCAACGAAAACCCTGGAGAGGTATCTCTGGTGGCCACAGCTCCCCTCACCAACCTAGCTCTGGCTGTAAGAATGGAGCCATCCTTCCCCAGCAAACTTAAAGGCCTTTACATCATGGGAGGCAACACAGAGTCCAGAGGAAACACCACAGTGTGTGCAGAGTTTAACTTCGCTGCCGACCCGGAAGCAGCTTACATCGTACTGAATGACTTCCTGTGTCCCACTTACATAGCCAGCTGGGAGTTCACCTGCTACAGCAAGCTGCCCTGGTCGTGGTGTGATGACTGGCTGGCCCAGGAGTCAGAGAAGGCTCGCTTCATGGCCCGGATCTTCCGCCACAGTATGGAAGAGTCGAACAGCGAGCGCTTCCAGGCGGAGATGGTTTACGGCATGGGCTTTGTGTCATGTGACTCCTACGCCATGGCGGCAGCCATCGACAACACCTTTGTCACCGAGAGCGACCACATGGCGGTGAGCGTGGAGCTGACGGGCACACACACGCGTGGCATGATGATCCTGGACACACTGGGCATGCTGAAGAAGACTCACAAGGCCTTCGTCATGAAGAAGGTGAACATGGTGAGGTTTGAGCAGATGATGATGGACGCTCTGAAGTAATCTCTAGGTCTGCTACAGCTAACCACTAGACTGTAGAAGTAAACAAACAACTACGAGAACGCTCTATGGGACCGTAACCAGGGAAAAGTGACAACTCCAACCTCATCCAGTCACCCCAAGACCGTGGACGTCAAGGCAGCCCCCAACACCTCTCTGATTGAGGGGTTGGGTTagatgtggaagacacatttcggttaaatgcattcagttgtgcaactctTTTCCCTTTTACTGTATTGTCAGCTCACGCTGATGTCAAGAATCATGCCTTGTCATTTAGataaacatttttaaataaatcGATTGAATTACAACTCA
>XM_021578793.2
CCAGCCGCCATATTGGGGTGCAGCGCACGGATGGCCCAACCCGGAAACGAGAGAAAGGTCAATGACTGCGGCAAGATTATCGAGATTCAATGTTTATAGCGCTTTGGAGGTTGTTCATCTTTACCGTAGACATACACGGAGGTTAGCGGAAAGCAGGTTCCCAGTTGCATGTGACGGTCACTTGTTAGCCAGGCCAAGAGGAGTAGCAGCCTGTCCACACCGACACAGCCCAGTCCTATTCTATTCAACTACAGGCTCCAGTATGAGTAGTAAGAAGCTGCTGGTGGATGTGGACTGTGGGGTGGATGATGCTCAGGCTATCATGATGGCACTGGCCACCCCtaatgtagaggtcctgggcatCACCTGTGTCCACGGCAACACCAATGTGGAGAACGTGTGCAAGAACACGCTGCGGGTGCTCCAAGTCTGCAACAGACTGGAGatcCCGGTATTCCGTGGTGCTGCCAAGCCTATCCTGGGGAATGTGATCAGTGCGGGAAACTTCCATGGCCAGGACGGGCTGGGGGATGCTCCAGACCCAAACGCTCCGGGGCTGGACATGCTGCAGATGGAAGGAGCGGTATCTGCACTGATCCGGATAGTCAACGAAAACCCTGGAGAGGTATCTCTGGTGGCCACAGCTCCCCTCACCAACCTAGCTCTGGCTGTAAGAATGGAGCCATCCTTCCCCAGCAAACTTAAAGGCCTTTACATCATGGGAGGCAACACAGAGTCCAGAGGAAACACCACAGTGTGTGCAGAGTTTAACTTCGCTGCCGACCCGGAAGCAGCTTACATCGTACTGAATGACTTCCTGTGTCCCACTTACATAGCCAGCTGGGAGTTCACCTGCTACAGCAAGCTGCCCTGGTCGTGGTGTGATGACTGGCTGGCCCAGGAGTCAGAGAAGGCTCGCTTCATGGCCCGGATCTTCCGCCACAGTATGGAAGAGTCGAACAGCGAGCGCTTCCAGGCGGAGATGGTTTACGGCATGGGCTTTGTGTCATGTGACTCCTACGCCATGGCGGCAGCCATCGACAACACCTTTGTCACCGAGAGCGACCACATGGCGGTGAGCGTGGAGCTGACGGGCACACACACGCGTGGCATGATGATCCTGGACACACTGGGCATGCTGAAGAAGACTCACAAGGCCTTCGTCATGAAGAAGGTGAACATGGTGAGGTTTGAGCAGATGATGATGGACGCTCTGAAGTAATCTCTAGGTCTGCTACAGCTAACCACTAGACTGTAGAAGTAAACAAACAACTACGAGAACGCTCTATGGGACCGTAACCAGGGAAAAGTGACAACTCCAACCTCATCCAGTCACCCCAAGACCGTGGACGTCAAGGCAGCCCCCAACACCTCTCTGATTGAGGGGTTGGGTTagatgtggaagacacatttcggttaaatgcattcagttgtgcaactctTTTCCCTTTTACTGTATTGTCAGCTCACGCTGATGTCAAGAATCATGCCTTGTCATTTAGataaacatttttaaataaatcGATTGAATTACAACTCA

Function

NR:

description
inosine-uridine preferring nucleoside hydrolase-like isoform X1

GO: NA

KEGG:

id description
K01240 URH1; uridine nucleosidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578794.2 False 1532 mRNA 0.53 7 8083817 8092847
XM_021578793.2 True 1540 mRNA 0.53 7 8083817 8092866

Neighbor

gene id symbol gene type direction distance location
mrpl30 mrpl30 coding downstream 86957 7992285 ~ 7996860 (-)
arhgef7a LOC106582025 coding downstream 178722 7791322 ~ 7905095 (-)
LOC110501302 LOC106582022 coding downstream 347018 7719470 ~ 7736799 (-)
LOC110501300 LOC106582021 coding downstream 415193 7608184 ~ 7668624 (-)
LOC110501299 LOC106582019 coding downstream 486374 7526258 ~ 7597443 (-)
inpp4aa LOC106586779 coding upstream 7879 8100745 ~ 8159515 (-)
mfsd9 mfsd9 coding upstream 69210 8162076 ~ 8173878 (-)
LOC110501321 fhl2 coding upstream 202015 8294881 ~ 8310469 (-)
LOC110502043 LOC106581982 coding upstream 350741 8443607 ~ 8492893 (-)
LOC110501323 LOC106581977 coding upstream 531949 8624815 ~ 8684792 (-)
G1771995 NA non-coding downstream 1888 8081311 ~ 8081929 (-)
G1771994 NA non-coding downstream 2619 8080895 ~ 8081198 (-)
G1771993 NA non-coding downstream 3024 8080252 ~ 8080793 (-)
G1771961 NA non-coding downstream 7269 8017053 ~ 8076548 (-)
G1771942 NA non-coding downstream 97107 7986492 ~ 7986710 (-)
G1771999 NA non-coding upstream 501 8093367 ~ 8093626 (-)
G1772025 NA non-coding upstream 59606 8152472 ~ 8153736 (-)
G1772031 NA non-coding upstream 67125 8159991 ~ 8160274 (-)
G1773604 NA non-coding upstream 71619 8164485 ~ 8165962 (-)
G1773693 NA non-coding upstream 231081 8323947 ~ 8328947 (-)
G1771426 LOC106582012 other downstream 619125 7462213 ~ 7464692 (-)
G1771092 NA other downstream 827100 7251784 ~ 7256717 (-)
G1769618 NA other downstream 2123002 5960150 ~ 5960815 (-)
G1769281 NA other downstream 2258510 5800761 ~ 5825307 (-)
fgf14 fgf14 other downstream 4309808 3447431 ~ 3774567 (-)
LOC110501325 LOC106581976 other upstream 644313 8737175 ~ 8758540 (-)
LOC110502107 grk1 other upstream 670426 8763292 ~ 8768047 (-)
gpr161a gpr161 other upstream 966110 9044945 ~ 9063520 (-)
G1774133 NA other upstream 1008886 9101752 ~ 9123249 (-)

Expression


Co-expression Network