dipk2b (cssa21hxorf36)


Basic Information

Item Value
gene id dipk2b
gene name cssa21hxorf36
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 9829206 ~ 9836013 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958699.1
tgtctgtctgtcttactaaGAATCAATAGCTGGGTACAATAGTGCTGATTTTGCTCTCGCCTCTCAACTATGAAATACTTGTAAGTCCCTTTACAGTGAGCTCAGAACACAAGGGATTGCATGTATGAATGTCACAGTCTTAGTGAATTGACGGTGTTATGACATAGACATCTGTAATGACCTGCTGTCCCAGCTGAATGGTTGTCAATCAACACCGGTGGTCATGATTCTGGGGGaaatcacacacaaacatatttcCTGTGCACGTAGTACTGTATATTCCTAACACACTTCAATGTTACAGTAATGTGTGGCAAGAGTCCCTGAGTGTAACGTCGTAAGGAatattatgacaaaacattttccacatacagtagttaatgttgatacacccaaaacacacggcACGCAATGTCCCAAGTCACCTGTCAAACTTCTGCCATCTGCCAGAGAAAATGGTTCAACTTCCATTGTTTCCAACGGATGCCGTGCAATGGCCAGGAAAGATCAACTGAGCCTCAACTGTGATCCAAGACTAACATAGACTAACAAGACAAACATAGAAAATATCAGGGTAATACATTTGTTTTCTGATTATGATTTTTTACCTTATTCTTATGACAAGCCACCATATCGGCAACTGTTCAAGTGGCCAACTCAAGGTTTGATTGGTGGATGTCCCCCGATACCACACTCCCATTGGCTGAGAAGCAGAGTTTCCCGGGGAACCTTACAGATGATTCATTAAGCTGGCGTCCTGTGGTCTTGtcgttcctctcctccccccgtcTGCACTCGTCCTCCGACCGTTCAATCTGTAGCTCGGTGGGACGGCAGGGTCCCTGCAGCATCGAGGCCGTCCTCAGGGTCACACCCAGATTCCAGAGCTTGAACCAATCACATCTTTTGCTGCCCCATATTGTGAAGGGTTTGGCACCTCCCCTGCTGCGCTGTCCCTCCCAGAGACTGCTGGACCGCGTTGTGCGCCGCTATGCTGAGGTGGTGGACGTGGGCAGTGTTCAGATGAAGCACTTCTCAGAGAGAGACAAACTACGGCTGCTCTACACGCTAGCTGTCAATCAACAGCCTCTCATACTGCAGATGTTCCCAGGCACCGAGGGCTGGCCATTCCCCCGCTACCAGGGCTCGTGTGGCAGGCTGATGGTGTGGGCAAGCTCCAGGCCTCTGTGGGGCCTTTATGGTTCCTCCAGGGAGTTCATCCAGAGGGTGGATGTGGCCTACCAGCTACTCCAGATCACCCAGGGCCTGGGCCACAACAGTCTGGGTTTCCTGCTCTACTACACCAGGCTAGAGGAGGATATGTTCGGCCTGCTGGATGACCAGCGAGTGTTCATCACAGATGCCAGCAGCATAGGGGTCATTGACCTGGAGCAGGggttCCCCCCAGACCCTCCCTCCCAAACAGGCTCTGGCGGGGACATCTTCTCCTGCCTGGGTCAGGGTGCATCCCCCTGCCATCGCTCTCCTCCCTGCAGCTCTGTCCGCCCTACCCAGAGCCTCACTCTGCTCTGCACAGCACTCCTGCCCAGACTGCTGCTCACAGAGAGGGGGGCCCAGCCAACCAGGCTACCCATGGAGGGTGAGGCAGAGGCGGGGAGGTTGGCAAGAGACGTGCCCCTGTTGCTGGGTGTTTGTGCAGACCCTAGCCAGCCTGACTGGAGGATCATGGCAGCAGTAGGATCTCTGATGGACCTGCTAAAACCCATGAGGCCCTGCAACCCACGCTACACCTACAGGTACCCAGAGTGCAGATACAACCAAGACTACTGAGAGCTGACAGGACTACAATACCCATACTACCCTGCTACAGCCATAGACAATGTTAAGTCCACAGGTGCCCAGAGTGCACATATGAACTGTGATCCAGACAGTTGGTGGGACTGCAGAGCTTTGATATTAGACTGACAAAGGGACTCTGTGGAGTGTTGTGTGCTGGAATGACTATGCACTGAGCTGAATTGACTACGCACACAAAGGGGGTGGTGGTTCTGCACGGGCAGTGTATGTGAAGTCTGTAGTACTTAGCAGCTTGTAGTGCTTGGCTGTAGTGTAGTGCTTGCCTGCTGCTTACCTGCTTTAGACCTCAGCTACTGTCAGGTAGTGAACCGGTCACAGCAGCTCTGTGCATCATAGGAGAGATGAACATGTAAAGAAGAAACATGAGAAGTTCCACATGTAAATAAAGAACTTCTGTTAAATGACGCATAAAACATCTTTCAAACAATAAAAGCATGTCAAGGAGGGTCTCTGCACAATGCTTTGCTAAAGCAATTTTATTCATTTAGAAAACAGGAGGGGCCGTGTATAAAATGACACGACTCCTTCAAATTTAATGGCAGGAACTCTGAAGAAAAAAATGACAGCATTCCAACAAAGATTCTCAAGCAATAAATATGCATTTTATAAATAAGGTCAATTTACAACAAGATTAGAAATAaaatgaaaatcacaaattaaagtTTATTCCTTAAAAGTC
>XM_021578880.2
GTGTTTCCTGTTGAGGTGCTGCTATTCAGGGTGGGtcggagagaaagaaagagagaaaaagagagggacatagatcgagacagagagagagcaaggagagagaaagaaaagactgACGAGGCCAAAACTGAGTTGTTTGTATTACGTTTCTGTCTGAGAACgtatcagtgtgagtgtgtgtcagtatgtCTATGCATGTGTGAACGTATTTGTGATACGTGTGATACGTGAGGGTGTGCGTGCAGTGCGTGGTCCTTCTCTCCATTCATTCCCATCATGCCCCTAAAGCGATGTGATCCGAGGGCCGTGGGTTTTGTGaggttgacagtgtgtgtgttgagttgGCTGCTATGTGTGTGTTGGGCTCCAACAGTAGTGGAGGCTGCTGGTACTCCCCCTGCTCCCCAGAAGAAAGCCCTCAGCCTGCAGAGAGCCTTCCTGGGGCTGGACAAGTGTAATGCCTGCGTGGGGACAACCATCTGCAAGAAGCTCTTGAAGGACCAGATAAGGTTTGATTGGTGGATGTCCCCCGATACCACACTCCCATTGGCTGAGAAGCAGAGTTTCCCGGGGAACCTTACAGATGATTCATTAAGCTGGCGTCCTGTGGTCTTGtcgttcctctcctccccccgtcTGCACTCGTCCTCCGACCGTTCAATCTGTAGCTCGGTGGGACGGCAGGGTCCCTGCAGCATCGAGGCCGTCCTCAGGGTCACACCCAGATTCCAGAGCTTGAACCAATCACATCTTTTGCTGCCCCATATTGTGAAGGGTTTGGCACCTCCCCTGCTGCGCTGTCCCTCCCAGAGACTGCTGGACCGCGTTGTGCGCCGCTATGCTGAGGTGGTGGACGTGGGCAGTGTTCAGATGAAGCACTTCTCAGAGAGAGACAAACTACGGCTGCTCTACACGCTAGCTGTCAATCAACAGCCTCTCATACTGCAGATGTTCCCAGGCACCGAGGGCTGGCCATTCCCCCGCTACCAGGGCTCGTGTGGCAGGCTGATGGTGTGGGCAAGCTCCAGGCCTCTGTGGGGCCTTTATGGTTCCTCCAGGGAGTTCATCCAGAGGGTGGATGTGGCCTACCAGCTACTCCAGATCACCCAGGGCCTGGGCCACAACAGTCTGGGTTTCCTGCTCTACTACACCAGGCTAGAGGAGGATATGTTCGGCCTGCTGGATGACCAGCGAGTGTTCATCACAGATGCCAGCAGCATAGGGGTCATTGACCTGGAGCAGGggttCCCCCCAGACCCTCCCTCCCAAACAGGCTCTGGCGGGGACATCTTCTCCTGCCTGGGTCAGGGTGCATCCCCCTGCCATCGCTCTCCTCCCTGCAGCTCTGTCCGCCCTACCCAGAGCCTCACTCTGCTCTGCACAGCACTCCTGCCCAGACTGCTGCTCACAGAGAGGGGGGCCCAGCCAACCAGGCTACCCATGGAGGGTGAGGCAGAGGCGGGGAGGTTGGCAAGAGACGTGCCCCTGTTGCTGGGTGTTTGTGCAGACCCTAGCCAGCCTGACTGGAGGATCATGGCAGCAGTAGGATCTCTGATGGACCTGCTAAAACCCATGAGGCCCTGCAACCCACGCTACACCTACAGGTACCCAGAGTGCAGATACAACCAAGACTACTGAGAGCTGACAGGACTACAATACCCATACTACCCTGCTACAGCCATAGACAATGTTAAGTCCACAGGTGCCCAGAGTGCACATATGAACTGTGATCCAGACAGTTGGTGGGACTGCAGAGCTTTGATATTAGACTGACAAAGGGACTCTGTGGAGTGTTGTGTGCTGGAATGACTATGCACTGAGCTGAATTGACTACGCACACAAAGGGGGTGGTGGTTCTGCACGGGCAGTGTATGTGAAGTCTGTAGTACTTAGCAGCTTGTAGTGCTTGGCTGTAGTGTAGTGCTTGCCTGCTGCTTACCTGCTTTAGACCTCAGCTACTGTCAGGTAGTGAACCGGTCACAGCAGCTCTGTGCATCATAGGAGAGATGAACATGTAAAGAAGAAACATGAGAAGTTCCACATGTAAATAAAGAACTTCTGTTAAATGACGCATAAAACATCTTTCAAACAATAAAAGCATGTCAAGGAGGGTCTCTGCACAATGCTTTGCTAAAGCAATTTTATTCATTTAGAAAACAGGAGGGGCCGTGTATAAAATGACACGACTCCTTCAAATTTAATGGCAGGAACTCTGAAGAAAAAAATGACAGCATTCCAACAAAGATTCTCAAGCAATAAATATGCATTTTATAAATAAGGTCAATTTACAACAAGATTAGAAATAaaatgaaaatcacaaattaaagtTTATTCCTTAAAAGTC
>TU2032190
CTTCAAATTTAATGGCAGGAACTCTGAAGAAAAAAATGACAGCATTCCAACAAAGATTCTCAAGCAATAAATATGCATTTTATAAATAAGGTCAATTTACAACAAGATTAGAAATAaaatgaaaatcaAAAAGTCTATGTGCAACTCATTTCTCTTGGTGACTTGGCTGTTTTTATCTCTCATTTTATTCCTTTCTTTACCTACAGAACCAAAAACATTATTATGgttccaaaataataataaaagctgta

Function

NR:

description
PREDICTED: deleted in autism-related protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958699.1 False 2497 mRNA 0.49 5 9829322 9835497
XM_021578880.2 False 2344 mRNA 0.52 5 9829322 9836013
TU2032190 True 251 lncRNA 0.28 2 9829206 9829476

Neighbor

gene id symbol gene type direction distance location
fundc1 fundc1 coding downstream 91426 9635535 ~ 9737896 (-)
efhc2 efhc2 coding downstream 94388 9713415 ~ 9734934 (-)
ndp ndp coding downstream 131298 9676683 ~ 9698024 (-)
mao LOC106581942 coding downstream 165856 9600179 ~ 9663466 (-)
LOC110501355 LOC106581891 coding downstream 250128 9577907 ~ 9579194 (-)
LOC118943652 NA coding upstream 47657 9883670 ~ 9883794 (-)
LOC118943578 NA coding upstream 68037 9878934 ~ 9912343 (-)
slc35a5 slc35a5 coding upstream 233530 10069543 ~ 10081799 (-)
vwa8 vwa8 coding upstream 306934 10142947 ~ 10236029 (-)
calcrla LOC106581932 coding upstream 603662 10439675 ~ 10498177 (-)
G1774463 NA non-coding downstream 54529 9774413 ~ 9774793 (-)
G1774410 NA non-coding downstream 161533 9667135 ~ 9667789 (-)
G1774395 NA non-coding downstream 177871 9651093 ~ 9651451 (-)
G1774525 NA non-coding upstream 28740 9864753 ~ 9864963 (-)
G1774527 NA non-coding upstream 30371 9866384 ~ 9866827 (-)
G1774528 NA non-coding upstream 31523 9867536 ~ 9867742 (-)
G1774497 NA non-coding upstream 42251 9878264 ~ 9878804 (-)
rpl8 LOC106586796 other downstream 537347 9289279 ~ 9291975 (-)
G1774133 NA other downstream 706073 9101752 ~ 9123249 (-)
gpr161a gpr161 other downstream 766121 9044945 ~ 9063520 (-)
LOC110502107 grk1 other downstream 1061275 8763292 ~ 8768047 (-)
G1777196 LOC100136012 other upstream 2005060 11841073 ~ 11843059 (-)
G1777286 NA other upstream 2205095 12041108 ~ 12041622 (-)
G1777441 LOC106581914 other upstream 2432204 12268217 ~ 12270114 (-)
LOC110501411 LOC106581904 other upstream 2784569 12620582 ~ 12624860 (-)
G1778140 efnb2 other upstream 3332767 13168780 ~ 13172979 (-)

Expression


Co-expression Network