LOC110501381


Basic Information

Item Value
gene id LOC110501381
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 10977273 ~ 10984214 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578913.2
ACACAACTCCCAGTCCCACGGACTGATAAGACCCTGAATCCCTAAAGGGGTTCTCATTCGCTGCAGCCATGAAACAATGTTTCCTTGGTTAGTTGGTTTTACTCTACTTCACAGGAGACCGACTGGGCTCCAGATTTTGCGTGTGACCTTCCAGGAACAGAAGACGAATTAATCTACAGATATAAGTCAAGTATCTATTTCTGACAGATGGAGAATCGACAGACTATTTTGACCTGCCTTATTGTGATCCTCATGGCCTTAACACGGCTTAGCGAGGGTGGCTACGTTGCACAGTGCAACAGGCTGACGTTCGACCACTACGTGCATGGTTACTGCCTCCCAAACTTCAACCAGAGCATGGAAGCTAGCAACTATCAGCACAGATGTCCCTGGCCCACCTTTAAAGACTCCTACATCATTTTGAAGCACTGTGTGGAACAAGTAGGCACCAGTACCGGGTGTGTGGAGCCTTCACTGAAGGATGACATCTTCCTAGAGGTGCACCAGATGTTCTTCTCACTCTGCTCGCGTGTGGAGGACCCGGCTTTCGCTGTCCTGATGTTGCTGATTCTGCCTTGTGTCATCACCATTCTGCTCCTACCCCTGCTGTGTGTCCACATCACCACAACCACTGGGCTCTGAGAGCCAACCCTCTTGGTGGACAAATcttacaaatgcacacacacacacacacaaaatacacttTCACGTGAGACACACTAGACGTAGCCAACAGAAAGTTGGATATCTGTTTAACATTCAGAAACACACATTTTTGCACACCCATATATTGTATGTTGAATAATGGTACTTATAGTATTGTAATACCCTGTTATGTTCTTAAATAAGTCTTGAATAAAAATGTGATAGATTTATTTGAAACACATAATAAAGATTTATTTGAAACA
>XM_021578912.2
GAAGCATGGGAAAGGAAGCAGCCTGACAGTGGTTTAGAGCTGGGAGATTGCATAAACACAACTCCCAGTCCCACGGACTGATAAGACCCTGAATCCCTAAAGGGGTTCTCATTCGCTGCAGCCATGAAACAATGTTTCCTTGGTTAGTTGGTTTTACTCTACTTCACAGGAGACCGACTGGGCTCCAGATTTTGCGTGTGACCTTCCAGGAACAGAAGACGAATTAATCTACAGATATAAGTCAAGATGGAGAATCGACAGACTATTTTGACCTGCCTTATTGTGATCCTCATGGCCTTAACACGGCTTAGCGAGGGTGGCTACGTTGCACAGTGCAACAGGCTGACGTTCGACCACTACGTGCATGGTTACTGCCTCCCAAACTTCAACCAGAGCATGGAAGCTAGCAACTATCAGCACAGATGTCCCTGGCCCACCTTTAAAGACTCCTACATCATTTTGAAGCACTGTGTGGAACAAGTAGGCACCAGTACCGGGTGTGTGGAGCCTTCACTGAAGGATGACATCTTCCTAGAGGTGCACCAGATGTTCTTCTCACTCTGCTCGCGTGTGGAGGACCCGGCTTTCGCTGTCCTGATGTTGCTGATTCTGCCTTGTGTCATCACCATTCTGCTCCTACCCCTGCTGTGTGTCCACATCACCACAACCACTGGGCTCTGAGAGCCAACCCTCTTGGTGGACAAATcttacaaatgcacacacacacacacacaaaatacacttTCACGTGAGACACACTAGACGTAGCCAACAGAAAGTTGGATATCTGTTTAACATTCAGAAACACACATTTTTGCACACCCATATATTGTATGTTGAATAATGGTACTTATAGTATTGTAATACCCTGTTATGTTCTTAAATAAGTCTTGAATAAAAATGTGATAGATTTATTTGAAACACATAATAAAGATTTATTTGAAACA

Function

NR:

description
uncharacterized protein LOC110501381

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578913.2 False 908 mRNA 0.45 4 10977273 10984159
XM_021578912.2 True 947 mRNA 0.45 4 10977273 10984214

Neighbor

gene id symbol gene type direction distance location
col5a2a LOC106581929 coding downstream 136741 10775267 ~ 10840532 (-)
LOC110501376 LOC106581931 coding downstream 425776 10502550 ~ 10551497 (-)
calcrla LOC106581932 coding downstream 479096 10439675 ~ 10498177 (-)
vwa8 vwa8 coding downstream 741244 10142947 ~ 10236029 (-)
slc35a5 slc35a5 coding downstream 895474 10069543 ~ 10081799 (-)
igfbp5 igfbp5 coding upstream 55287 11039501 ~ 11054592 (-)
tns1b LOC100286503 coding upstream 502694 11486908 ~ 11791569 (-)
LOC110501383 LOC106581884 coding upstream 832036 11816250 ~ 11819211 (-)
fkbp7 fkbp7 coding upstream 855362 11839576 ~ 11844296 (-)
nemp2 LOC106581926 coding upstream 879291 11863505 ~ 11874073 (-)
G1775302 NA non-coding downstream 51 10973279 ~ 10977222 (-)
G1775300 NA non-coding downstream 4254 10972519 ~ 10973019 (-)
G1775292 LOC106581928 non-coding downstream 11000 10966024 ~ 10966273 (-)
G1775291 NA non-coding downstream 12569 10964331 ~ 10964704 (-)
G1775286 NA non-coding downstream 20278 10956749 ~ 10956995 (-)
G1775312 NA non-coding upstream 3877 10988091 ~ 10988536 (-)
G1775558 NA non-coding upstream 75012 11059226 ~ 11059574 (-)
G1775605 NA non-coding upstream 145118 11129332 ~ 11129566 (-)
G1775608 NA non-coding upstream 147566 11131780 ~ 11132205 (-)
G1775693 NA non-coding upstream 269301 11253515 ~ 11253731 (-)
fundc1 fundc1 other downstream 1239417 9635535 ~ 9737896 (-)
rpl8 LOC106586796 other downstream 1685298 9289279 ~ 9291975 (-)
G1774133 NA other downstream 1854024 9101752 ~ 9123249 (-)
gpr161a gpr161 other downstream 1914072 9044945 ~ 9063520 (-)
LOC110502107 grk1 other downstream 2209226 8763292 ~ 8768047 (-)
G1777196 LOC100136012 other upstream 856859 11841073 ~ 11843059 (-)
G1777286 NA other upstream 1056894 12041108 ~ 12041622 (-)
G1777441 LOC106581914 other upstream 1284003 12268217 ~ 12270114 (-)
LOC110501411 LOC106581904 other upstream 1636368 12620582 ~ 12624860 (-)
G1778140 efnb2 other upstream 2184566 13168780 ~ 13172979 (-)

Expression


Co-expression Network