LOC110501826


Basic Information

Item Value
gene id LOC110501826
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37762840 ~ 37765227 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110501826
ATGGACCGCATCGGAAAGATCATCTTCTATGAGGACAAAAACTTCCAGGGTCACCACTTTGAATGCAGTAGCGATTGCCCTGAGCTGAGCTCCCACTTAAGCCGCTGCAACTCCATCCGGGTGGAGAGTGGGAACTGGGTGCTGTACGAGAGGCCCAACTACCTGGGCTCTCAGTACATCCTGACCAGGGGGGAGTACCTTGACTACCAGAGCTGGATGGGCTACAATAACAACATCAGGTCCTGCCGCATCATCCGCAATCTAACTGGCATGTTCAGGATCTGAATCTACAAGCGTCCTGACTTTGCCGGTCAGACGATGGAGTTCAGCGAAGCCAAGCCTAACCTCCCCGAGCACTGGCGTCACCGCGAGGTGCACTGGGTGTTCTATGAGCACCCCAACTACCGCGGCCGCCAGCACCTGCTGGAGAGGGCAGAGTACCGCCGCTTCACCGAGTGGAACGCCATGCACCCTAAAGTGGGGTCCATCCGCCACGTTCAGAACTTTTAG

Function

NR:

description
PREDICTED: beta-crystallin S-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110501826 True 510 mRNA 0.56 3 37762840 37765227

Neighbor

gene id symbol gene type direction distance location
LOC110502101 LOC106582334 coding downstream 39373 37576415 ~ 37723467 (-)
LOC110501819 LOC106582336 coding downstream 203038 37545726 ~ 37575934 (-)
LOC110501818 LOC106582337 coding downstream 234214 37432933 ~ 37528626 (-)
LOC110501817 LOC106582339 coding downstream 351330 37399070 ~ 37411510 (-)
LOC110501816 LOC106582342 coding downstream 372524 37358144 ~ 37390316 (-)
LOC110501827 LOC106582332 coding upstream 4433 37769660 ~ 37770890 (-)
LOC118943607 LOC106582311 coding upstream 14044 37779271 ~ 37779640 (-)
LOC110501821 LOC106582326 coding upstream 33752 37798979 ~ 37800091 (-)
LOC110502127 LOC106582319 coding upstream 65315 37830542 ~ 37831485 (-)
LOC110502140 LOC106582322 coding upstream 68826 37834053 ~ 37835172 (-)
G1807018 NA non-coding downstream 3705 37758858 ~ 37759135 (-)
G1806717 NA non-coding downstream 223341 37539300 ~ 37539499 (-)
G1806708 NA non-coding downstream 233156 37529365 ~ 37529684 (-)
G1807030 NA non-coding upstream 8981 37774208 ~ 37774524 (-)
G1807074 NA non-coding upstream 82806 37848033 ~ 37848768 (-)
G1807075 NA non-coding upstream 84874 37850101 ~ 37850374 (-)
LOC110501831 LOC106582318 non-coding upstream 86703 37851828 ~ 37860908 (-)
G1807587 LOC100380630 non-coding upstream 99737 37864964 ~ 37866937 (-)
G1807020 LOC105030512 other downstream 2592 37759971 ~ 37760248 (-)
G1806449 NA other downstream 650366 37043561 ~ 37112474 (-)
G1806393 NA other downstream 826753 36935658 ~ 36936087 (-)
LOC110501806 sema5b other downstream 1184129 36552698 ~ 36837583 (-)
G1805927 LOC106582360 other downstream 1703072 36057844 ~ 36059768 (-)
G1807750 LOC106582372 other upstream 428195 38193422 ~ 38195096 (-)
G1807731 NA other upstream 443563 38208790 ~ 38241273 (-)
LOC110502145 LOC106586333 other upstream 810639 38520872 ~ 38726596 (-)
G1808299 NA other upstream 1178909 38944136 ~ 38944530 (-)
LOC110501878 LOC106582406 other upstream 2971421 40736648 ~ 40813437 (-)

Expression


Co-expression Network