LOC110501821 (LOC106582326)


Basic Information

Item Value
gene id LOC110501821
gene name LOC106582326
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37798979 ~ 37800091 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579661.2
GCATGGTGCTGGGTCAGGGGTTTGAACAATGGAGCTAGGGATTCTTTAGGTTTGGTCAGGTATAAAAGAAAGGGTTAAACCCGGTAGGAAGTCAGTTCAGGAGCAGAAACCAGCAGTACAGTGAGCAAACATGTCCAACACCAGCATGAACATGGGCAGGGCCACCTTCTACGAGGACAGAAACTTCCAGGGCCGCTCTTATGAGTGCAGCTCCGACTGCCCCGACATTTCCTCCTACATGAGCAGGTGCCAATCCTGCAGGGTCCAGAGTGGATGCTTCATGGTGTACGAGCGCCCCAACTACATGGGAAACCAGTACTTCATGAAGAGGGGAGAGTACTCAGACTACCAGAGTATGATGGGAATGAGCGATGGTTTCAGGTCCTGCCGCATGATCCCCATGCATCGTGGAAACTTCAGGATGAGGATCTATGAGAGGGAGAACTTCGGGGGTCAGATGCATGAGATGATGGACGACTGTGACTCCATCCAGGAGCGTTACCGTATGTCAGACTGCCAGTCCTGCAACGTGATGGACGGCCACTGGCTGATGTTTGAGCAGCCCCACTTCAGAGGCAGGCAGATGTACATGAGGCCTGGAGAGTACAGGAGCTTCAGAGATATGGGCATGGGAATGGGAGGCATGGGCGGCATGGGTGGCATGAGGTTCATGAGCATGAAGCGTATCATGGACAACATGTCTATGTAAATTCTTCAAATGTTGTATGAACATTGTTGATTAAATTTGTTCCAATTTTAGAACTGCTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579661.2 True 770 mRNA 0.51 3 37798979 37800091

Neighbor

gene id symbol gene type direction distance location
LOC118943607 LOC106582311 coding downstream 19339 37779271 ~ 37779640 (-)
LOC110501827 LOC106582332 coding downstream 28089 37769660 ~ 37770890 (-)
LOC110501826 NA coding downstream 33752 37762840 ~ 37765227 (-)
LOC110502101 LOC106582334 coding downstream 75512 37576415 ~ 37723467 (-)
LOC110501819 LOC106582336 coding downstream 239177 37545726 ~ 37575934 (-)
LOC110502127 LOC106582319 coding upstream 30451 37830542 ~ 37831485 (-)
LOC110502140 LOC106582322 coding upstream 33962 37834053 ~ 37835172 (-)
LOC110502128 LOC106582310 coding upstream 38910 37839001 ~ 37840676 (-)
LOC110501831 LOC106582318 coding upstream 51737 37851828 ~ 37860908 (-)
LOC110502141 LOC106582316 coding upstream 103057 37903148 ~ 37967285 (-)
G1807030 NA non-coding downstream 24455 37774208 ~ 37774524 (-)
G1807018 NA non-coding downstream 39844 37758858 ~ 37759135 (-)
G1806717 NA non-coding downstream 259480 37539300 ~ 37539499 (-)
G1807074 NA non-coding upstream 47942 37848033 ~ 37848768 (-)
G1807075 NA non-coding upstream 50010 37850101 ~ 37850374 (-)
G1807587 LOC100380630 non-coding upstream 64873 37864964 ~ 37866937 (-)
G1807588 NA non-coding upstream 72676 37872767 ~ 37873860 (-)
G1807020 LOC105030512 other downstream 38731 37759971 ~ 37760248 (-)
G1806449 NA other downstream 686505 37043561 ~ 37112474 (-)
G1806393 NA other downstream 862892 36935658 ~ 36936087 (-)
LOC110501806 sema5b other downstream 1220268 36552698 ~ 36837583 (-)
G1805927 LOC106582360 other downstream 1739211 36057844 ~ 36059768 (-)
G1807750 LOC106582372 other upstream 393331 38193422 ~ 38195096 (-)
G1807731 NA other upstream 408699 38208790 ~ 38241273 (-)
LOC110502145 LOC106586333 other upstream 775775 38520872 ~ 38726596 (-)
G1808299 NA other upstream 1144045 38944136 ~ 38944530 (-)
LOC110501878 LOC106582406 other upstream 2936557 40736648 ~ 40813437 (-)

Expression


Co-expression Network