LOC110502127 (LOC106582319)


Basic Information

Item Value
gene id LOC110502127
gene name LOC106582319
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37830542 ~ 37831485 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579995.2
GTcaaccaccaaccaccaacaTGGGCAAGATTACCTTCTACGAGGACAGGAACTTCCAGGGCCGCTCCTATGAGTGCATGAGCGACTGCCCCGACATTTCCTCCTACATGTCCCGCTGCCAGTCCTGCAGAGTGGAGAGCGGCTGCTTCATGGCGTACGAGCGCGCCAGCTTCATGGGCCAGCAGTTCTTCATGAGGAGGGGAGAGTACCCTGACATGCAGCGCATGATAAGCATGGGCATGATGTTTGACAACATCCGGTCCTGTAGAATGATCCCCCAGCACAGAGGATCCTTCAGGATGAGGATCTACGAGAGGGAGAACTTCGGAGGTCAGATGATGGAGCTGATGGACGACTGTGACTCCATCCAGGAGCGTTACCGTATGTCAGACTGCCAGTCCTGCAACGTGATGGACGGCCACTGGCTGATGTACGAGCAGCCCCACTTCAGAGGCAGGCAGATGTACATGAGGCCTGGAGAGTACAGGAGCTTCAGAGAGATGGGCATGAGTGGCATGAAGTTCATGAGCATGAGGCGTATCAATGACATGtgcaattaaatgtatttaattgttcaAGGTAATAAAATAATTGAAGATCTTTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579995.2 True 605 mRNA 0.52 3 37830542 37831485

Neighbor

gene id symbol gene type direction distance location
LOC110501821 LOC106582326 coding downstream 30451 37798979 ~ 37800091 (-)
LOC118943607 LOC106582311 coding downstream 50902 37779271 ~ 37779640 (-)
LOC110501827 LOC106582332 coding downstream 59652 37769660 ~ 37770890 (-)
LOC110501826 NA coding downstream 65315 37762840 ~ 37765227 (-)
LOC110502101 LOC106582334 coding downstream 107075 37576415 ~ 37723467 (-)
LOC110502140 LOC106582322 coding upstream 2568 37834053 ~ 37835172 (-)
LOC110502128 LOC106582310 coding upstream 7516 37839001 ~ 37840676 (-)
LOC110501831 LOC106582318 coding upstream 20343 37851828 ~ 37860908 (-)
LOC110502141 LOC106582316 coding upstream 71663 37903148 ~ 37967285 (-)
LOC110501835 LOC106586372 coding upstream 140727 37972212 ~ 37995938 (-)
G1807030 NA non-coding downstream 56018 37774208 ~ 37774524 (-)
G1807018 NA non-coding downstream 71407 37758858 ~ 37759135 (-)
LOC110501819 LOC106582336 non-coding downstream 254608 37545726 ~ 37575934 (-)
G1806717 NA non-coding downstream 291043 37539300 ~ 37539499 (-)
G1807074 NA non-coding upstream 16548 37848033 ~ 37848768 (-)
G1807075 NA non-coding upstream 18616 37850101 ~ 37850374 (-)
G1807587 LOC100380630 non-coding upstream 33479 37864964 ~ 37866937 (-)
G1807588 NA non-coding upstream 41282 37872767 ~ 37873860 (-)
G1807020 LOC105030512 other downstream 70294 37759971 ~ 37760248 (-)
G1806449 NA other downstream 718068 37043561 ~ 37112474 (-)
G1806393 NA other downstream 894455 36935658 ~ 36936087 (-)
LOC110501806 sema5b other downstream 1251831 36552698 ~ 36837583 (-)
G1805927 LOC106582360 other downstream 1770774 36057844 ~ 36059768 (-)
G1807750 LOC106582372 other upstream 361937 38193422 ~ 38195096 (-)
G1807731 NA other upstream 377305 38208790 ~ 38241273 (-)
LOC110502145 LOC106586333 other upstream 744381 38520872 ~ 38726596 (-)
G1808299 NA other upstream 1112651 38944136 ~ 38944530 (-)
LOC110501878 LOC106582406 other upstream 2905163 40736648 ~ 40813437 (-)

Expression


Co-expression Network