ccnyl1 (LOC106582379)


Basic Information

Item Value
gene id ccnyl1
gene name LOC106582379
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 38874414 ~ 38892741 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959286.1
cactagttaccactcCCAGAAAGTCAGAAACCCCTCTTATTTCAACAATTTATcttcctataatgtgattttaaCCTGAACTCCAACCCTAAATTAAGAATTAAAagcaattgtatttatttattaattgttTTTGCTATAGTCACATGTTCCGTTCAATTGAACGTTCCAAACGTAAAAGCGTACTGAACGCAGCCCAGGCAGCGGTGTGTTCAGAGCTGATGGCGGTGGTGGCGGGTAGCGGACCGCAGAACTGGccggtggagaggaggggataacGTAGCTTTTTTTTAGTCCACAAGTTGTGAGATCGAAAATTAACTTCGACAAGGCTTGACCAGATTACATTCACTAAATGATTTGAAACTCCCCGGCTTTGATTTCTTTATCAAGCGGGTAGCTACGTTAGTGTAGGCCTCAAGCCTCGGATAAAGTTGTCGTCTGATCCTGGGATTGGGAATCCAAGAAAGATCTCTCACGCCAGTCCTATCTCGGACAATTGGGAATCCCTGTTCGGAAACTATTGGGGATCCATGCTTGGAAGAACTAGCTAGTGGCATATGAGTGGAGTAGTTTTTTTTCGTTAAATGATTGTTTAAACGGCAGCTCCGGAGGCGTTGATGCATATTGGCAAAGTTATTAAAGGGACGAGCTAACTAGTTAATCTATCCTACAGACAATGTTCCATCGCTGCTAGCTGATTTCGCAAAGGAATGATGAATGGGCAACCGCTTGTAATGCTCGGATTTAAACAGCTGCTTGATTACCTCAGTGTTACAAATAATTCGTTTCGTTAGTTAGCAACCCTGTAAATAATAGAGCATAGAGCACTCGAACAAACATCGATTTTTATTTTGCCGTGCAGCCAGCAATCTGATTCATGTTGCGGACGGAGCACACACTCAGATGGCCAGGGTTGCAATTTATTGACATTACTGGTCCACAATTTAGTTGACCATTTACGTGTTTCTCTCATCTCTGTTTTAATTacagatgtgtttttttttttaatcctagGACTTGTAGCTGAATCATAGGCTTATGTAATGTATGTATGCAGCAGTAAAGCTAAATATCTGGCATCCTTGATTTGAAGGAACTTTGCACTACTTAATTAGTGTTGAGGTTATCCCTGGTTTGGAATGGGGAATACGGTTTCATGCTGCGTGTCGCCCGAGGAGAGCCCAAAGCTACCAAGGCAACCGGTGGACCGCCACGAAGACTACCAAATAATTACGGACGTGAGTGACGACACCGGCCCGTACCTGCAGCACATCAGCGACAGAGAAGTCCCTGACGAACTGGCCCAGGAGTCCAACCCATCAGACCATGCCAGAGCCAGCACCATCTTCCTCTGCAAGTCCCAGACAGACAGCGAATTGCGAGACAAGAGGAAAAGCAATCACATAAACCATGTCAGTCATACCTCTCCTGGCCCTCTCTCTAAGAAGTACAGTTCCTGTTCCACCATCTTTATAGATGACAGCACGGTCAGCCAGCCTAACTTGAAAAGCACAATTAAATGTGTTACATTAGCAATATACTACCACATTAAAAACAGggacTCAGACAGGTCACTGGACATTTTTGATGAGAAGATGCACCCCTTATCGAGAGAGCAGGTCCCTGACAACTACTCTGTTATGGACCCTGAGCACAAACTCATCTACCGCTTTGTCAGAACTCTGTTCAGCGCTGCACAGCTCACTGCAGAGTGTGCCATCGTCACCTTGGTGTACCTGGAGCGTCTGCTGACCTACGCTGAGATAGACATCTGTCCCTGCAACTGGAAGCGTATCGTACTGGGAGCCATCCTGCTGGCGTCCAAGGTGTGGGACGACCAGGCCGTGTGGAACGTAGACTACTGCCAGATCCTCAAAGACATCACCGTGGAGGACATGAACGAGATGGAGCGTCACTTCCTGGAACTTCTGCAGTTCAACATCAACGTACCGGCCAGTGTTTATGCTAAGTACTACTTTGACCTGCGATCTCTGGCCGAGGACAACAACCTCCTCTTTCCCCTCGAGCCACTCAGCAACGAGAGGGCACAGAAACTGGAGgccatCTCCAGACTGTGTGAAGACAAGTACAAGGACCTGAGCCGAGCGGCCATGAGGAGGTCCTTCAGCGCTGACAACCTGGTGGGCATCCGCCGTTCCAACGCTGTGCTCTCATAGGCCAGCCACACTTCAGCGTTGTGCTCTCATTAGTCAGCGACAAATCTGTCACTCCAATACTGCTCTCTCATAGGACAGCCACACTCCAACATTGTGCTCTCACTGGACAGACACAATGGTGGAGTTAATTTCACATGGCCCTGTGCCCCGGAATGGGGGAAGTTTGCTCATTTTAGACTTCCATTGGTCCTTAAGTGAAAAGTCCACCCGCCTGGAGCACTGAGCCATGCAAAATTAACTGCACCAATATCTGACCTCTACAGCCCAACCAACACCCCAGGATACCTGCCACAAACCCAGCCCCTCAGAGACTGGTCGAGGCAGCACCATAGGCCCTGTCCCGTCCCAGCCCCTCAGAGACTGGTCGAGGCAGCACCATAGGCCCTGTCCCGTCCCAGACCCTAAGCGTAAAATAACTTCTTCACTACATAGAAAGAAGgggaaaaatacttttttttggtgCTTACTATGTAGGCTACTAGCTGTGAAATGTACCTGTTTTTAAATTGAAAATAATTTGGAGATGGAGTATTTTAAATAAACACTAAACAT

Function

NR:

description
PREDICTED: cyclin-Y-like protein 1

GO:

id name namespace
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity biological_process
GO:0019901 protein kinase binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959286.1 True 2732 mRNA 0.47 10 38874414 38892741

Neighbor

gene id symbol gene type direction distance location
LOC110502145 LOC106586333 coding downstream 147818 38520872 ~ 38726596 (-)
LOC110501850 dbr1 coding downstream 382919 38485821 ~ 38491495 (-)
LOC110501846 NA coding downstream 401930 38467191 ~ 38472484 (-)
LOC110501845 LOC106582367 coding downstream 423671 38438184 ~ 38450743 (-)
LOC110502144 LOC106586344 coding downstream 491365 38304468 ~ 38383049 (-)
LOC110501854 LOC106582380 coding upstream 6743 38899484 ~ 38929741 (-)
LOC118943608 NA coding upstream 18723 38911464 ~ 38913545 (-)
LOC118943609 NA coding upstream 85766 38975839 ~ 38989602 (-)
klf7b klf7 coding upstream 105941 38998682 ~ 39154770 (-)
LOC110502146 LOC106582388 coding upstream 536931 39429672 ~ 39436466 (-)
G1808063 NA non-coding downstream 7241 38866970 ~ 38867173 (-)
G1808062 NA non-coding downstream 7657 38866557 ~ 38866757 (-)
G1808061 NA non-coding downstream 11293 38862688 ~ 38863121 (-)
G1808056 NA non-coding downstream 31133 38840902 ~ 38843281 (-)
G1808054 NA non-coding downstream 34758 38838994 ~ 38839656 (-)
G1808284 NA non-coding upstream 22507 38915248 ~ 38917152 (-)
G1808297 NA non-coding upstream 48251 38940992 ~ 38941210 (-)
G1808302 NA non-coding upstream 59489 38952230 ~ 38952558 (-)
G1808343 NA non-coding upstream 166362 39059103 ~ 39059436 (-)
G1807731 NA other downstream 661227 38208790 ~ 38241273 (-)
G1807750 LOC106582372 other downstream 679318 38193422 ~ 38195096 (-)
G1807020 LOC105030512 other downstream 1114166 37759971 ~ 37760248 (-)
G1806449 NA other downstream 1761940 37043561 ~ 37112474 (-)
G1808299 NA other upstream 51395 38944136 ~ 38944530 (-)
LOC110501878 LOC106582406 other upstream 1843907 40736648 ~ 40813437 (-)
LOC110501886 rhg15 other upstream 2555158 41447899 ~ 41523764 (-)
G1811042 NA other upstream 2712233 41604974 ~ 41605231 (-)
G1812079 LOC106582433 other upstream 3494081 42386822 ~ 42389273 (-)

Expression


Co-expression Network